CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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egrh-1
(
Caenorhabditis elegans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
WBGene00007772
T131578_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
egrh-1
M00622_2.00
Caenorhabditis elegans
CSCCCMCR
YGKGGGSG
PBM
Narasimhan et al.(2015)
pTH9317
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00622_2.00
C2H2 ZF
51
75
YKCPRDGCDRRFSRSDELTRHIRIH
M00622_2.00
C2H2 ZF
81
103
FQCRICMRAFSRSDHLTTHVRTH
M00622_2.00
C2H2 ZF
109
131
FSCDICGRKFARSDEQKRHTKVH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
C27C12.2
C2H2 ZF
374
398
YKCPRDGCDRRFSRSDELTRHIRIH
C27C12.2
C2H2 ZF
404
426
FQCRICMRAFSRSDHLTTHVRTH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis elegans
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Egr3
Rattus norvegicus
ENSRNOG00000017828
I
0.803
EGR2
Tursiops truncatus
ENSTTRG00000010004
N
0.803
EGR3
Monodelphis domestica
ENSMODG00000023162
N
0.803
EGR3
Loxodonta africana
ENSLAFG00000028225
I
0.803
ASIS018880
Anopheles sinensis
ASIS018880
N
0.797
AMAM019679
Anopheles maculatus
AMAM019679
N
0.797
ENSSHAG00000006904
Sarcophilus harrisii
ENSSHAG00000006904
N
0.794
ENSPMAG00000005737
Petromyzon marinus
ENSPMAG00000005737
N
0.784
ACUA000547
Anopheles culicifacies
ACUA000547
N
0.778
HelroG93112
Helobdella robusta
HelroG93112
N
0.766