bcl-11 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00017430 T131625_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bcl-11
M00641_2.00		 Caenorhabditis elegans
NNTGACCRNN
NNYGGTCANN		 PBM
Narasimhan et al.(2015)
pTH10807		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00641_2.00 C2H2 ZF 51 72
M00641_2.00 C2H2 ZF 78 100
M00641_2.00 C2H2 ZF 108 129

DNA Binding Domains

Protein ID Domain From To Sequence
F13H6.1a C2H2 ZF 495 516
F13H6.1a C2H2 ZF 522 544
F13H6.1a C2H2 ZF 552 573
F13H6.1b.1 C2H2 ZF 499 520
F13H6.1b.1 C2H2 ZF 526 548
F13H6.1b.1 C2H2 ZF 556 577
F13H6.1b.2 C2H2 ZF 499 520
F13H6.1b.2 C2H2 ZF 526 548
F13H6.1b.2 C2H2 ZF 556 577

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE30875 Caenorhabditis remanei CRE30875 I 0.827
CBN13459 Caenorhabditis brenneri CBN13459 I 0.827
CBG18919 Caenorhabditis briggsae CBG18919 I 0.827
L596_g14520 Steinernema carpocapsae L596_g14520 I 0.824
RSKR_0000889800 Rhabditophanes kr3021 RSKR_0000889800 I 0.824
L889_g19350 Steinernema feltiae L889_g19350 I 0.824
L892_g10848 Steinernema scapterisci L892_g10848 I 0.824
L898_g13372 Steinernema monticolum L898_g13372 I 0.824
CJA41396 Caenorhabditis japonica CJA41396 I 0.824
SSTP_0000584500 Strongyloides stercoralis SSTP_0000584500 I 0.820
SPAL_0001358300 Strongyloides papillosus SPAL_0001358300 I 0.820
SVE_0953600 Strongyloides venezuelensis SVE_0953600 I 0.820
DME_0000006201 Dracunculus medinensis DME_0000006201 I 0.820
ASU_10535 Ascaris suum ASU_10535 I 0.820
TCNE_0001279201 Toxocara canis TCNE_0001279201 I 0.820
PTRK_0001160400 Parastrongyloides trichosuri PTRK_0001160400 I 0.820
WUBG_02612 Wuchereria bancrofti WUBG_02612 I 0.817
WBGene00244008 Onchocerca volvulus WBGene00244008 I 0.817
SMUV_0000624601 Syphacia muris SMUV_0000624601 I 0.817
Bm3354 Brugia malayi Bm3354 I 0.817
nAv.1.0.1.g03797 Acanthocheilonema viteae nAv.1.0.1.g03797 I 0.817
EVEC_0001125701 Enterobius vermicularis EVEC_0001125701 I 0.817
nOo.2.0.1.g03888 Onchocerca ochengi nOo.2.0.1.g03888 I 0.817
nDi.2.2.2.g00707 Dirofilaria immitis nDi.2.2.2.g00707 I 0.817
OFLC_0000354401 Onchocerca flexuosa OFLC_0000354401 I 0.817
LOAG_18740 Loa loa LOAG_18740 I 0.817
nLs.2.1.2.g09142 Litomosoides sigmodontis nLs.2.1.2.g09142 I 0.817
MhA1_Contig454.frz3.fgene1 Meloidogyne hapla MhA1_Contig454.frz3.fgene1 I 0.804
scaffold248-EXSNAP2012.2 Pristionchus exspectatus scaffold248-EXSNAP2012.2 I 0.804
Minc07594 Meloidogyne incognita Minc07594 I 0.804
PPA20237 Pristionchus pacificus PPA20237 I 0.804
GPLIN_001288500 Globodera pallida GPLIN_001288500 I 0.800
BXY_0383300 Bursaphelenchus xylophilus BXY_0383300 I 0.797
ASIM_0001463201 Anisakis simplex ASIM_0001463201 I 0.797
D918_08675 Trichuris suis D918_08675 I 0.794
EFV59674 Trichinella spiralis EFV59674 I 0.794
TMUE_s0041001100 Trichuris muris TMUE_s0041001100 I 0.794
D917_09068 Trichinella nativa D917_09068 I 0.794
HCOI00904800 Haemonchus contortus HCOI00904800 I 0.788
ANCCEY_05532 Ancylostoma ceylanicum ANCCEY_05532 I 0.788
HPLM_0001331501 Haemonchus placei HPLM_0001331501 I 0.788
HCOI01698200 Haemonchus contortus HCOI01698200 I 0.788
ANCCAN_24528 Ancylostoma caninum ANCCAN_24528 I 0.788
SBAD_0000338201 Soboliphyme baturini SBAD_0000338201 I 0.787
TELCIR_04334 Teladorsagia circumcincta TELCIR_04334 I 0.765
TELCIR_24378 Teladorsagia circumcincta TELCIR_24378 I 0.765
DICVIV_00143 Dictyocaulus viviparus DICVIV_00143 I 0.765
NECAME_02245 Necator americanus NECAME_02245 I 0.765
ANCDUO_15498 Ancylostoma duodenale ANCDUO_15498 I 0.765