WBGene00239980 (Onchocerca volvulus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00239980 T131676_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
opa
M03668_2.00
Drosophila melanogaster
BVCCCCCCRYNGHB

VDCNRYGGGGGGBV
SELEX
Nitta et al.(2015)
opa_1
0.758 0.793
opa
M05861_2.00
Drosophila melanogaster
VCCCCCCRYNGNK

MNCNRYGGGGGGB
SMiLE-seq
Isakova et al.(2017)
Opa
0.758 0.793
opa
M06468_2.00
Drosophila melanogaster
GMCCCCCCGCDG

CHGCGGGGGGKC
B1H
Mathelier et al.(2014)
MA0456.1
0.758 0.793
opa
M06062_2.00
Drosophila melanogaster
GMCCCCCCRCDG

CHGYGGGGGGKC
B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002
0.758 0.793
opa
M06063_2.00
Drosophila melanogaster
MKVMMCCCCMCYR

YRGKGGGGKKBMK
B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002
0.758 0.793
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OVOC3171 C2H2 ZF 221 248
OVOC3171 C2H2 ZF 254 276
OVOC3171 C2H2 ZF 282 306
OVOC3171 C2H2 ZF 312 336

Links

Other C2H2 ZF family TFs
Other Onchocerca volvulus TFs

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59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action