WBGene00239980 (Onchocerca volvulus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00239980 T131676_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.758 0.793
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.758 0.793
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.758 0.793
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.758 0.793
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.758 0.793
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OVOC3171 C2H2 ZF 221 248
OVOC3171 C2H2 ZF 254 276
OVOC3171 C2H2 ZF 282 306
OVOC3171 C2H2 ZF 312 336

Links

Other C2H2 ZF family TFs
Other Onchocerca volvulus TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCLT_0000586501 Thelazia callipaeda TCLT_0000586501 I 0.822
nLs.2.1.2.g02824 Litomosoides sigmodontis nLs.2.1.2.g02824 I 0.810
Pvit_01334 Pogona vitticeps Pvit_01334 I 0.785
ENSPFOG00000012980 Poecilia formosa ENSPFOG00000012980 I 0.785
ZIC1 Monodelphis domestica ENSMODG00000021251 I 0.782
nRc.2.0.1.g22468 Romanomermis culicivorax nRc.2.0.1.g22468 I 0.778
XP_002153782.1 Hydra magnipapillata XP_002153782.1 I 0.777
CGI_10016117 Crassostrea gigas CGI_10016117 I 0.775
ENSGMOG00000004419 Gadus morhua ENSGMOG00000004419 I 0.773
ENSONIG00000002719 Oreochromis niloticus ENSONIG00000002719 I 0.773
zic6 Danio rerio ENSDARG00000071496 I 0.773
ENSAMXG00000012318 Astyanax mexicanus ENSAMXG00000012318 I 0.773
Sakowv30026420m.g Saccoglossus kowalevskii Sakowv30026420m.g I 0.773
NEMVEDRAFT_v1g25267 Nematostella vectensis NEMVEDRAFT_v1g25267 I 0.772
CGI_10016115 Crassostrea gigas CGI_10016115 I 0.772
SPAL_0001746600 Strongyloides papillosus SPAL_0001746600 I 0.771
ENSMMUP00000019456 Macaca fascicularis ENSMMUP00000019456 I 0.771
ZIC5 Sus scrofa ENSSSCG00000009521 I 0.771
ANCCEY_00370 Ancylostoma ceylanicum ANCCEY_00370 I 0.771
SVE_0347600 Strongyloides venezuelensis SVE_0347600 I 0.771
ZIC5 Ochotona princeps ENSOPRG00000007526 I 0.771
ZIC5 Oryctolagus cuniculus ENSOCUG00000026498 I 0.771
ENSPPYG00000005471 Pongo abelii ENSPPYG00000005471 I 0.771
ENSDORG00000012706 Dipodomys ordii ENSDORG00000012706 I 0.771
DAPPUDRAFT_290567 Daphnia pulex DAPPUDRAFT_290567 I 0.770
TC010234 Tribolium castaneum TC010234 I 0.770
ENSSHAG00000015025 Sarcophilus harrisii ENSSHAG00000015025 I 0.770
AGAP001291 Anopheles gambiae AGAP001291 I 0.770
KGM_22387 Danaus plexippus KGM_22387 I 0.770
MDOA000052 Musca domestica MDOA000052 I 0.770
XP_002159358.1 Hydra magnipapillata XP_002159358.1 I 0.769
csin109208 Clonorchis sinensis csin109208 I 0.768
Ogr17257 Ophisaurus gracilis Ogr17257 I 0.768
T265_00048 Opisthorchis viverrini T265_00048 I 0.768
ENSACAG00000003701 Anolis carolinensis ENSACAG00000003701 I 0.768
Cmyd_10016551 Chelonia mydas Cmyd_10016551 I 0.768
ENSOANG00000012152 Ornithorhynchus anatinus ENSOANG00000012152 I 0.768
SSTP_0000201100 Strongyloides stercoralis SSTP_0000201100 I 0.768
NV11451 Nasonia vitripennis NV11451 I 0.767
GB54250 Apis mellifera GB54250 I 0.767
tetur11g00650 Tetranychus urticae tetur11g00650 I 0.766
CJA16978 Caenorhabditis japonica CJA16978 I 0.764
TMUE_s0101002100 Trichuris muris TMUE_s0101002100 I 0.763
SMU15033928 Schmidtea mediterranea SMU15033928 I 0.761
SMU15031708 Schmidtea mediterranea SMU15031708 I 0.759
RSKR_0001155900 Rhabditophanes kr3021 RSKR_0001155900 I 0.758
GJ11051 Drosophila virilis FBgn0198317 I 0.758
GF18915 Drosophila ananassae FBgn0095929 I 0.758
GG12590 Drosophila erecta FBgn0104878 I 0.758
GA10924 Drosophila pseudoobscura FBgn0070980 I 0.758
opa Drosophila melanogaster FBgn0003002 D 0.758
ENSAMXG00000000658 Astyanax mexicanus ENSAMXG00000000658 I 0.758
GH23039 Drosophila grimshawi FBgn0130496 I 0.758
GI10245 Drosophila mojavensis FBgn0133010 I 0.758
GD19752 Drosophila simulans FBgn0191241 I 0.758
GM10780 Drosophila sechellia FBgn0165726 I 0.758
GL21621 Drosophila persimilis FBgn0159214 I 0.758
GK13239 Drosophila willistoni FBgn0215248 I 0.758
PTRK_0000799900 Parastrongyloides trichosuri PTRK_0000799900 I 0.756