TMUE_s0101002100 (Trichuris muris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TMUE_s0101002100 T157919_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.804 0.924
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.804 0.924
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.804 0.924
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.804 0.924
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.804 0.924
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TMUE_s0101002100 C2H2 ZF 258 285
TMUE_s0101002100 C2H2 ZF 291 315
TMUE_s0101002100 C2H2 ZF 321 345
TMUE_s0101002100 C2H2 ZF 351 375

Links

Other C2H2 ZF family TFs
Other Trichuris muris TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GH23039 Drosophila grimshawi FBgn0130496 I 0.804
GG12590 Drosophila erecta FBgn0104878 I 0.804
GF18915 Drosophila ananassae FBgn0095929 I 0.804
GA10924 Drosophila pseudoobscura FBgn0070980 I 0.804
GI10245 Drosophila mojavensis FBgn0133010 I 0.804
GL21621 Drosophila persimilis FBgn0159214 I 0.804
GJ11051 Drosophila virilis FBgn0198317 I 0.804
GD19752 Drosophila simulans FBgn0191241 I 0.804
GM10780 Drosophila sechellia FBgn0165726 I 0.804
opa Drosophila melanogaster FBgn0003002 D 0.804
GK13239 Drosophila willistoni FBgn0215248 I 0.804
TC010234 Tribolium castaneum TC010234 I 0.795
AGAP001291 Anopheles gambiae AGAP001291 I 0.792
KGM_22387 Danaus plexippus KGM_22387 I 0.792
MDOA000052 Musca domestica MDOA000052 I 0.789
CGI_10016115 Crassostrea gigas CGI_10016115 I 0.787
NV11451 Nasonia vitripennis NV11451 I 0.787
ENSOANG00000012152 Ornithorhynchus anatinus ENSOANG00000012152 I 0.785
tetur11g00650 Tetranychus urticae tetur11g00650 I 0.785
ENSMMUP00000019456 Macaca fascicularis ENSMMUP00000019456 I 0.785
SNAPOd2T00002718001 Oikopleura dioica SNAPOd2T00002718001 I 0.785
ZIC5 Ochotona princeps ENSOPRG00000007526 I 0.785
ZIC5 Oryctolagus cuniculus ENSOCUG00000026498 I 0.785
ENSDORG00000012706 Dipodomys ordii ENSDORG00000012706 I 0.785
ZIC5 Sus scrofa ENSSSCG00000009521 I 0.785
ENSPPYG00000005471 Pongo abelii ENSPPYG00000005471 I 0.785
Cmyd_10016551 Chelonia mydas Cmyd_10016551 I 0.782
nRc.2.0.1.g22468 Romanomermis culicivorax nRc.2.0.1.g22468 I 0.782
SMU15033928 Schmidtea mediterranea SMU15033928 I 0.779
Sakowv30026420m.g Saccoglossus kowalevskii Sakowv30026420m.g I 0.778
ENSPFOG00000012980 Poecilia formosa ENSPFOG00000012980 I 0.778
ENSGMOG00000004419 Gadus morhua ENSGMOG00000004419 I 0.778
ENSAMXG00000012318 Astyanax mexicanus ENSAMXG00000012318 I 0.778
zic6 Danio rerio ENSDARG00000071496 I 0.778
ENSONIG00000002719 Oreochromis niloticus ENSONIG00000002719 I 0.778
GB54250 Apis mellifera GB54250 I 0.775
ZIC1 Monodelphis domestica ENSMODG00000021251 I 0.775
ENSSHAG00000015025 Sarcophilus harrisii ENSSHAG00000015025 I 0.775
Ogr17257 Ophisaurus gracilis Ogr17257 I 0.773
Pvit_01334 Pogona vitticeps Pvit_01334 I 0.772
ENSAMXG00000000658 Astyanax mexicanus ENSAMXG00000000658 I 0.772
DAPPUDRAFT_290567 Daphnia pulex DAPPUDRAFT_290567 I 0.772
ENSACAG00000003701 Anolis carolinensis ENSACAG00000003701 I 0.770
SPAL_0001746600 Strongyloides papillosus SPAL_0001746600 I 0.768
SSTP_0000201100 Strongyloides stercoralis SSTP_0000201100 I 0.768
SMU15031708 Schmidtea mediterranea SMU15031708 I 0.768
SVE_0347600 Strongyloides venezuelensis SVE_0347600 I 0.768
NEMVEDRAFT_v1g121215 Nematostella vectensis NEMVEDRAFT_v1g121215 I 0.765
XP_002159358.1 Hydra magnipapillata XP_002159358.1 I 0.765
ENSCSAVG00000001907 Ciona savignyi ENSCSAVG00000001907 I 0.765
macho1 Ciona intestinalis ENSCING00000007968 I 0.765
WBGene00239980 Onchocerca volvulus WBGene00239980 I 0.763
NEMVEDRAFT_v1g25267 Nematostella vectensis NEMVEDRAFT_v1g25267 I 0.763
CGI_10016117 Crassostrea gigas CGI_10016117 I 0.763
BXY_1106000 Bursaphelenchus xylophilus BXY_1106000 I 0.761
T265_00048 Opisthorchis viverrini T265_00048 I 0.760
csin109208 Clonorchis sinensis csin109208 I 0.760
SNAPOd2T00019413001 Oikopleura dioica SNAPOd2T00019413001 N 0.758
TCLT_0000586501 Thelazia callipaeda TCLT_0000586501 I 0.758
nLs.2.1.2.g02824 Litomosoides sigmodontis nLs.2.1.2.g02824 I 0.758
ANCCEY_00370 Ancylostoma ceylanicum ANCCEY_00370 I 0.757
PTRK_0000799900 Parastrongyloides trichosuri PTRK_0000799900 I 0.756
RSKR_0001155900 Rhabditophanes kr3021 RSKR_0001155900 I 0.755