CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZIC1
(
Monodelphis domestica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMODG00000021251
T100154_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
opa
M03668_2.00
Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV
SELEX
Nitta et al.(2015)
opa_1
0.782
0.902
opa
M05861_2.00
Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB
SMiLE-seq
Isakova et al.(2017)
Opa
0.782
0.902
opa
M06468_2.00
Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC
B1H
Mathelier et al.(2014)
MA0456.1
0.782
0.902
opa
M06062_2.00
Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC
B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002
0.782
0.902
opa
M06063_2.00
Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK
B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002
0.782
0.902
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000026563
C2H2 ZF
270
297
HICFWEECPREGKPFKAKYKLVNHIRVH
ENSMODP00000026563
C2H2 ZF
303
327
FPCPFPGCGKVFARSENLKIHKRTH
ENSMODP00000026563
C2H2 ZF
333
357
FKCEFEGCDRRFANSSDRKKHMHVH
ENSMODP00000026563
C2H2 ZF
363
385
YLCKMCDKSYTHPSSLRKHMKVH
Links
Other
C2H2 ZF
family TFs
Other
Monodelphis domestica
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSHAG00000015025
Sarcophilus harrisii
ENSSHAG00000015025
I
0.815
Pvit_01334
Pogona vitticeps
Pvit_01334
I
0.807
ENSPFOG00000012980
Poecilia formosa
ENSPFOG00000012980
I
0.802
CGI_10016115
Crassostrea gigas
CGI_10016115
I
0.797
Sakowv30026420m.g
Saccoglossus kowalevskii
Sakowv30026420m.g
I
0.795
TC010234
Tribolium castaneum
TC010234
I
0.794
KGM_22387
Danaus plexippus
KGM_22387
I
0.794
MDOA000052
Musca domestica
MDOA000052
I
0.792
DAPPUDRAFT_290567
Daphnia pulex
DAPPUDRAFT_290567
I
0.792
AGAP001291
Anopheles gambiae
AGAP001291
I
0.791
ENSGMOG00000004419
Gadus morhua
ENSGMOG00000004419
I
0.790
ENSONIG00000002719
Oreochromis niloticus
ENSONIG00000002719
I
0.790
ENSAMXG00000012318
Astyanax mexicanus
ENSAMXG00000012318
I
0.790
zic6
Danio rerio
ENSDARG00000071496
I
0.790
nRc.2.0.1.g22468
Romanomermis culicivorax
nRc.2.0.1.g22468
I
0.790
NV11451
Nasonia vitripennis
NV11451
I
0.789
GB54250
Apis mellifera
GB54250
I
0.789
CGI_10016117
Crassostrea gigas
CGI_10016117
I
0.789
ENSOANG00000012152
Ornithorhynchus anatinus
ENSOANG00000012152
I
0.786
Ogr17257
Ophisaurus gracilis
Ogr17257
I
0.786
ZIC5
Sus scrofa
ENSSSCG00000009521
I
0.783
ENSACAG00000003701
Anolis carolinensis
ENSACAG00000003701
I
0.783
ENSPPYG00000005471
Pongo abelii
ENSPPYG00000005471
I
0.783
Cmyd_10016551
Chelonia mydas
Cmyd_10016551
I
0.783
ENSMMUP00000019456
Macaca fascicularis
ENSMMUP00000019456
I
0.783
ENSDORG00000012706
Dipodomys ordii
ENSDORG00000012706
I
0.783
ZIC5
Ochotona princeps
ENSOPRG00000007526
I
0.783
ZIC5
Oryctolagus cuniculus
ENSOCUG00000026498
I
0.783
WBGene00239980
Onchocerca volvulus
WBGene00239980
I
0.782
GK13239
Drosophila willistoni
FBgn0215248
I
0.782
TCLT_0000586501
Thelazia callipaeda
TCLT_0000586501
I
0.782
GJ11051
Drosophila virilis
FBgn0198317
I
0.782
GG12590
Drosophila erecta
FBgn0104878
I
0.782
GH23039
Drosophila grimshawi
FBgn0130496
I
0.782
GF18915
Drosophila ananassae
FBgn0095929
I
0.782
opa
Drosophila melanogaster
FBgn0003002
D
0.782
GD19752
Drosophila simulans
FBgn0191241
I
0.782
GI10245
Drosophila mojavensis
FBgn0133010
I
0.782
GA10924
Drosophila pseudoobscura
FBgn0070980
I
0.782
GM10780
Drosophila sechellia
FBgn0165726
I
0.782
GL21621
Drosophila persimilis
FBgn0159214
I
0.782
ENSAMXG00000000658
Astyanax mexicanus
ENSAMXG00000000658
I
0.781
NEMVEDRAFT_v1g25267
Nematostella vectensis
NEMVEDRAFT_v1g25267
I
0.780
XP_002159358.1
Hydra magnipapillata
XP_002159358.1
I
0.780
XP_002153782.1
Hydra magnipapillata
XP_002153782.1
I
0.779
tetur11g00650
Tetranychus urticae
tetur11g00650
I
0.777
csin109208
Clonorchis sinensis
csin109208
I
0.775
TMUE_s0101002100
Trichuris muris
TMUE_s0101002100
I
0.775
T265_00048
Opisthorchis viverrini
T265_00048
I
0.775
SSTP_0000201100
Strongyloides stercoralis
SSTP_0000201100
I
0.774
SNAPOd2T00002718001
Oikopleura dioica
SNAPOd2T00002718001
I
0.774
SPAL_0001746600
Strongyloides papillosus
SPAL_0001746600
I
0.774
SVE_0347600
Strongyloides venezuelensis
SVE_0347600
I
0.774
macho1
Ciona intestinalis
ENSCING00000007968
I
0.773
ENSCSAVG00000001907
Ciona savignyi
ENSCSAVG00000001907
I
0.773
SMU15031708
Schmidtea mediterranea
SMU15031708
I
0.772
nLs.2.1.2.g02824
Litomosoides sigmodontis
nLs.2.1.2.g02824
I
0.770
SMU15033928
Schmidtea mediterranea
SMU15033928
I
0.767
CJA16978
Caenorhabditis japonica
CJA16978
I
0.762
ANCCEY_00370
Ancylostoma ceylanicum
ANCCEY_00370
I
0.761
HelroG77001
Helobdella robusta
HelroG77001
N
0.758
NEMVEDRAFT_v1g121215
Nematostella vectensis
NEMVEDRAFT_v1g121215
I
0.756