CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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YGR067C
(
Saccharomyces cerevisiae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
YGR067C
T131840_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YGR067C
M00029_2.00
Saccharomyces cerevisiae
HVCCCCNC
GNGGGGBD
PBM
Badis et al.(2008)
YGR067C_2151
(Direct)
(Direct)
YGR067C
M01534_2.00
Saccharomyces cerevisiae
NCCCCDCNNN
NNNGHGGGGN
PBM
Zhu et al.(2009)
Ygr067c
(Direct)
(Direct)
YGR067C
M07459_2.00
Saccharomyces cerevisiae
NCCCCDCNNNNNNN
NNNNNNNGHGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0425.1
(Direct)
(Direct)
YGR067C
M08528_2.00
Saccharomyces cerevisiae
NCCCCDCNNNNNNN
NNNNNNNGHGGGGN
Misc
DeBoer et al.(2011)
YGR067C_548
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00029_2.00
C2H2 ZF
7
29
YICSFCLKPFSRSEHKIRHERSH
M00029_2.00
C2H2 ZF
35
58
FQCQVCKHSFVRRDLLQRHIRTVH
M01534_2.00
C2H2 ZF
8
30
YICSFCLKPFSRSEHKIRHERSH
M01534_2.00
C2H2 ZF
36
59
FQCQVCKHSFVRRDLLQRHIRTVH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
YGR067C
C2H2 ZF
8
30
YICSFCLKPFSRSEHKIRHERSH
YGR067C
C2H2 ZF
36
59
FQCQVCKHSFVRRDLLQRHIRTVH
Links
Other
C2H2 ZF
family TFs
Other
Saccharomyces cerevisiae
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy