USV1 (Saccharomyces cerevisiae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 YPL230W T131856_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
USV1
M00041_2.00
Saccharomyces cerevisiae
NCCCCTGD

HCAGGGGN
PBM
Badis et al.(2008)
YPL230W_2051
(Direct) (Direct)
USV1
M01538_2.00
Saccharomyces cerevisiae
NYCCCTKD

HMAGGGRN
PBM
Zhu et al.(2009)
Usv1
(Direct) (Direct)
USV1
M08544_2.00
Saccharomyces cerevisiae
CCCCT

AGGGG
Misc
DeBoer et al.(2011)
YPL230W_509
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KTB10507.1
M01040_2.00
Candida glabrata
NBCCCTKR

YMAGGGVN
PBM
Siggers et al.(2014)
CAGL0L00583gCgla
0.765 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00041_2.00 C2H2 ZF 40 65
M00041_2.00 C2H2 ZF 71 94
M01538_2.00 C2H2 ZF 41 66
M01538_2.00 C2H2 ZF 72 95

DNA Binding Domains

Protein ID Domain From To Sequence
YPL230W C2H2 ZF 41 66
YPL230W C2H2 ZF 72 95

Links

Other C2H2 ZF family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action