CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aan_R003503
(
Calypte anna
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Aan_R003503
T132523_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN
NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.825
0.991
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.825
0.991
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN
NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.825
0.991
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH
DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.825
0.991
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN
NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.797
0.861
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aan_R003503
C2H2 ZF
374
396
YVCIPCGKGFPSSEQLNAHVEAH
Aan_R003503
C2H2 ZF
428
450
YRCSSCDKSYKDPATLRQHEKTH
Aan_R003503
C2H2 ZF
456
478
YPCTICGKKFTQRGTMTRHMRSH
Aan_R003503
C2H2 ZF
484
506
FACDACGMRFTRQYRLTEHMRIH
Aan_R003503
C2H2 ZF
512
534
YECQVCGGKFAQQRNLISHMKMH
Links
Other
C2H2 ZF
family TFs
Other
Calypte anna
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy