CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aan_R005955
(
Calypte anna
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Aan_R005955
T132566_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.803
0.982
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.803
0.982
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.803
0.982
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aan_R005955
C2H2 ZF
7
28
FRCEDCDELFQSKLELRRHKKY
Aan_R005955
C2H2 ZF
55
77
YECKDCERMFPNKYSLEQHMVIH
Aan_R005955
C2H2 ZF
83
105
YKCDQCPKAFNWKSNLIRHQMSH
Aan_R005955
C2H2 ZF
111
134
FECENCVKVFTDPSNLQRHIRSQH
Aan_R005955
C2H2 ZF
140
162
HACPDCGKTFATSSGLKQHKHIH
Aan_R005955
C2H2 ZF
168
190
FICEVCHKSYTQFSNLCRHKRMH
Aan_R005955
C2H2 ZF
197
218
IKCKDCGQMFSTTSSLNKHRRF
Aan_R005955
C2H2 ZF
719
741
YTCRYCGKIFPRSANLTRHLRTH
Aan_R005955
C2H2 ZF
747
770
YRCKYCDRSFSISSNLQRHVRNIH
Aan_R005955
C2H2 ZF
776
798
FKCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Calypte anna
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy