CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R003945
(
Aptenodytes forsteri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Afo_R003945
T132779_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MECOM
M08862_2.00
Homo sapiens
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND
Misc
Kulakovskiy et al.(2013)
EVI1_HUMAN.H11MO.0.B
0.823
0.991
MECOM
M10125_2.00
Homo sapiens
TTATCTTATCTTRTCW
WGAYAAGATAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_01
0.823
0.991
MECOM
M10126_2.00
Homo sapiens
TTATCTTRTCH
DGAYAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_02
0.823
0.991
MECOM
M10127_2.00
Homo sapiens
TTATCTTATCT
AGATAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_03
0.823
0.991
MECOM
M10128_2.00
Homo sapiens
TAWYYWDWYHTATYH
DRATADRAHWRRAWA
Transfac
Matys et al.(2006)
V$EVI1_04
0.823
0.991
MECOM
M10129_2.00
Homo sapiens
HTATCTTATCT
AGATAAGATAD
Transfac
Matys et al.(2006)
V$EVI1_05
0.823
0.991
MECOM
M10130_2.00
Homo sapiens
TTATCTTGT
ACAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_06
0.823
0.991
MECOM
M10131_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVI1_Q3
0.823
0.991
MECOM
M10132_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVI_Q6
0.823
0.991
Mecom
M02667_2.00
Mus musculus
KNTTATCTTRTCTH
DAGAYAAGATAANM
SELEX
Mathelier et al.(2014)
MA0029.1
0.818
0.978
Mecom
M08980_2.00
Mus musculus
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND
Misc
Kulakovskiy et al.(2013)
EVI1_MOUSE.H11MO.0.B
0.818
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R003945
C2H2 ZF
5
26
YRCEDCDQLFESKAELVDHQKF
Afo_R003945
C2H2 ZF
59
81
QECKECDQVFPDLQSLEKHMLSH
Afo_R003945
C2H2 ZF
87
109
YKCDQCPKAFNWKSNLIRHQMSH
Afo_R003945
C2H2 ZF
115
138
YECENCAKVFTDPSNLQRHIRSQH
Afo_R003945
C2H2 ZF
144
166
HACPECGKTFATSSGLKQHKHIH
Afo_R003945
C2H2 ZF
172
194
FICEVCHKSYTQFSNLCRHKRMH
Afo_R003945
C2H2 ZF
201
222
IKCKDCGQMFSTTSSLNKHRRF
Afo_R003945
C2H2 ZF
719
741
YTCRYCGKIFPRSANLTRHLRTH
Afo_R003945
C2H2 ZF
747
770
YRCKYCDRSFSISSNLQRHVRNIH
Afo_R003945
C2H2 ZF
776
798
FKCHLCDRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Aptenodytes forsteri
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy