Brh_R009954 (Buceros rhinoceros)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Brh_R009954 T133626_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MECOM
M08862_2.00
Homo sapiens
HNTNTTATCTTRTCWN

NWGAYAAGATAANAND
Misc
Kulakovskiy et al.(2013)
EVI1_HUMAN.H11MO.0.B
0.823 0.991
MECOM
M10125_2.00
Homo sapiens
TTATCTTATCTTRTCW

WGAYAAGATAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_01
0.823 0.991
MECOM
M10126_2.00
Homo sapiens
TTATCTTRTCH

DGAYAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_02
0.823 0.991
MECOM
M10127_2.00
Homo sapiens
TTATCTTATCT

AGATAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_03
0.823 0.991
MECOM
M10128_2.00
Homo sapiens
TAWYYWDWYHTATYH

DRATADRAHWRRAWA
Transfac
Matys et al.(2006)
V$EVI1_04
0.823 0.991
MECOM
M10129_2.00
Homo sapiens
HTATCTTATCT

AGATAAGATAD
Transfac
Matys et al.(2006)
V$EVI1_05
0.823 0.991
MECOM
M10130_2.00
Homo sapiens
TTATCTTGT

ACAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_06
0.823 0.991
MECOM
M10131_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVI1_Q3
0.823 0.991
MECOM
M10132_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVI_Q6
0.823 0.991
Mecom
M02667_2.00
Mus musculus
KNTTATCTTRTCTH

DAGAYAAGATAANM
SELEX
Mathelier et al.(2014)
MA0029.1
0.818 0.978
Mecom
M08980_2.00
Mus musculus
HNTNTTATCTTRTCWN

NWGAYAAGATAANAND
Misc
Kulakovskiy et al.(2013)
EVI1_MOUSE.H11MO.0.B
0.818 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R009954 C2H2 ZF 21 42
Brh_R009954 C2H2 ZF 75 97
Brh_R009954 C2H2 ZF 103 125
Brh_R009954 C2H2 ZF 131 154
Brh_R009954 C2H2 ZF 160 182
Brh_R009954 C2H2 ZF 188 210
Brh_R009954 C2H2 ZF 217 238
Brh_R009954 C2H2 ZF 735 757
Brh_R009954 C2H2 ZF 763 786
Brh_R009954 C2H2 ZF 792 814

Links

Other C2H2 ZF family TFs
Other Buceros rhinoceros TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29736.m002089 Ricinus communis 29736.m002089 I 0.000
30146.m003509 Ricinus communis 30146.m003509 I 0.000
30147.m014028 Ricinus communis 30147.m014028 I 0.000
AMTR_s00074p00097250 Amborella trichopoda AMTR_s00074p00097250 I 0.000
Aquca_001_00262 Aquilegia coerulea Aquca_001_00262 I 0.000
Aquca_002_00384 Aquilegia coerulea Aquca_002_00384 I 0.000
Aquca_004_00370 Aquilegia coerulea Aquca_004_00370 I 0.000
AT1G70000 Arabidopsis thaliana AT1G70000 I 0.000
AT3G16350 Arabidopsis thaliana AT3G16350 D 0.000
BGIOSGA003931 Oryza indica BGIOSGA003931 I 0.000
BGIOSGA015321 Oryza indica BGIOSGA015321 I 0.000
BGIOSGA017461 Oryza indica BGIOSGA017461 I 0.000
Bo5g126180 Brassica oleracea Bo5g126180 I 0.000
Bostr.10273s0355 Boechera stricta Bostr.10273s0355 I 0.000
Bostr.28625s0055 Boechera stricta Bostr.28625s0055 I 0.000
Bra027170 Brassica rapa Bra027170 I 0.000
BRADI2G05590 Brachypodium distachyon BRADI2G05590 I 0.000
BRADI2G42870 Brachypodium distachyon BRADI2G42870 I 0.000
Cagra.10840s0008 Capsella grandiflora Cagra.10840s0008 I 0.000
Cagra.6624s0006 Capsella grandiflora Cagra.6624s0006 I 0.000
Carubv10013924m.g Capsella rubella Carubv10013924m.g I 0.000
Carubv10020813m.g Capsella rubella Carubv10020813m.g I 0.000
cassava17572.valid.m1 Manihot esculenta cassava17572.valid.m1 I 0.000
cassava22335.valid.m1 Manihot esculenta cassava22335.valid.m1 I 0.000
cassava22868.valid.m1 Manihot esculenta cassava22868.valid.m1 I 0.000
cassava23010.valid.m1 Manihot esculenta cassava23010.valid.m1 I 0.000
cassava23011.valid.m1 Manihot esculenta cassava23011.valid.m1 I 0.000
cassava31470.valid.m1 Manihot esculenta cassava31470.valid.m1 I 0.000
cassava4263.m1 Manihot esculenta cassava4263.m1 I 0.000
Ca_02786 Cicer arietinum Ca_02786 I 0.000
Ca_17597 Cicer arietinum Ca_17597 I 0.000
chr2.CM0028.230.nd Lotus japonicus chr2.CM0028.230.nd I 0.000
Ciclev10009011m.g Citrus clementina Ciclev10009011m.g I 0.000
Ciclev10021454m.g Citrus clementina Ciclev10021454m.g I 0.000
Ciclev10025950m.g Citrus clementina Ciclev10025950m.g I 0.000
Ciclev10032167m.g Citrus clementina Ciclev10032167m.g I 0.000
Cla000916 Citrullus lanatus Cla000916 I 0.000
Cla010296 Citrullus lanatus Cla010296 I 0.000
Cucsa.098110 Cucumis sativus Cucsa.098110 I 0.000
Cucsa.285620 Cucumis sativus Cucsa.285620 I 0.000
Cucsa.361050 Cucumis sativus Cucsa.361050 I 0.000
Cucsa.397260 Cucumis sativus Cucsa.397260 I 0.000
estExt_fgenesh1_pg.C_1880060 Physcomitrella patens estExt_fgenesh1_pg.C_1880060 I 0.000
estExt_fgenesh1_pg.C_60110 Micromonas pusilla estExt_fgenesh1_pg.C_60110 I 0.000
Eucgr.B00377 Eucalyptus grandis Eucgr.B00377 I 0.000
Eucgr.B02575 Eucalyptus grandis Eucgr.B02575 I 0.000
Eucgr.J02939 Eucalyptus grandis Eucgr.J02939 I 0.000
Eucgr.K02897 Eucalyptus grandis Eucgr.K02897 I 0.000
EuGene.0300010169 Micromonas sp RCC299 EuGene.0300010169 I 0.000
evm.TU.supercontig_2092.1 Carica papaya evm.TU.supercontig_2092.1 I 0.000
evm.TU.supercontig_35.12 Carica papaya evm.TU.supercontig_35.12 I 0.000
evm.TU.supercontig_5.314 Carica papaya evm.TU.supercontig_5.314 I 0.000
e_gw1.89.66.1 Physcomitrella patens e_gw1.89.66.1 I 0.000
F775_08891 Aegilops tauschii F775_08891 I 0.000
F775_11223 Aegilops tauschii F775_11223 I 0.000
F775_18928 Aegilops tauschii F775_18928 I 0.000
F775_32973 Aegilops tauschii F775_32973 I 0.000
fgenesh1_pg.scaffold_66000046 Physcomitrella patens fgenesh1_pg.scaffold_66000046 I 0.000
fgenesh1_pg.scaffold_66000048 Physcomitrella patens fgenesh1_pg.scaffold_66000048 I 0.000
fgenesh1_pg.scaffold_70000111 Physcomitrella patens fgenesh1_pg.scaffold_70000111 D 0.000
fgenesh2_kg.2__1257__AT1G70000.1 Arabidopsis lyrata fgenesh2_kg.2__1257__AT1G70000.1 I 0.000
fgenesh2_kg.3__1788__AT3G16350.1 Arabidopsis lyrata fgenesh2_kg.3__1788__AT3G16350.1 I 0.000
gene00738-v1.0-hybrid Fragaria vesca gene00738-v1.0-hybrid I 0.000
gene09510-v1.0-hybrid Fragaria vesca gene09510-v1.0-hybrid I 0.000
GLYMA01G04530 Glycine max GLYMA01G04530 I 0.000
GLYMA02G03020 Glycine max GLYMA02G03020 I 0.000
GLYMA04G34720 Glycine max GLYMA04G34720 I 0.000
GLYMA05G01640 Glycine max GLYMA05G01640 I 0.000
GLYMA05G36290 Glycine max GLYMA05G36290 I 0.000
GLYMA06G19960 Glycine max GLYMA06G19960 I 0.000
GLYMA07G08081 Glycine max GLYMA07G08081 N 0.000
GLYMA13G43120 Glycine max GLYMA13G43120 I 0.000
GLYMA15G02250 Glycine max GLYMA15G02250 I 0.000
GLYMA17G10250 Glycine max GLYMA17G10250 I 0.000
Gorai.004G196500 Gossypium raimondii Gorai.004G196500 I 0.000
Gorai.007G034000 Gossypium raimondii Gorai.007G034000 I 0.000
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.000
Gorai.008G233500 Gossypium raimondii Gorai.008G233500 I 0.000
Gorai.009G137300 Gossypium raimondii Gorai.009G137300 I 0.000
GRMZM2G176568 Zea mays GRMZM2G176568 I 0.000
GSMUA_Achr1G01650_001 Musa acuminata GSMUA_Achr1G01650_001 I 0.000
GSMUA_Achr9G05930_001 Musa acuminata GSMUA_Achr9G05930_001 I 0.000
gw1.89.65.1 Physcomitrella patens gw1.89.65.1 I 0.000
LjSGA_014616.1 Lotus japonicus LjSGA_014616.1 I 0.000
LjSGA_030087.1 Lotus japonicus LjSGA_030087.1 I 0.000
LPERR01G18690 Leersia perrieri LPERR01G18690 I 0.000
Lus10004248.g Linum usitatissimum Lus10004248.g I 0.000
Lus10006826.g Linum usitatissimum Lus10006826.g I 0.000
Lus10013289.g Linum usitatissimum Lus10013289.g I 0.000
Lus10025822.g Linum usitatissimum Lus10025822.g I 0.000
Lus10036652.g Linum usitatissimum Lus10036652.g I 0.000
Lus10037560.g Linum usitatissimum Lus10037560.g I 0.000
Lus10038279.g Linum usitatissimum Lus10038279.g I 0.000
MDP0000136727 Malus domestica MDP0000136727 I 0.000
MDP0000230601 Malus domestica MDP0000230601 I 0.000
MDP0000233793 Malus domestica MDP0000233793 I 0.000
MDP0000758053 Malus domestica MDP0000758053 I 0.000
MDP0000938309 Malus domestica MDP0000938309 I 0.000
mgf003276m Mimulus guttatus mgf003276m I 0.000
mgf012785m Mimulus guttatus mgf012785m I 0.000
mgf017789m Mimulus guttatus mgf017789m I 0.000
mgf026007m Mimulus guttatus mgf026007m I 0.000
MLOC_20277 Hordeum vulgare MLOC_20277 I 0.000
MLOC_52982 Hordeum vulgare MLOC_52982 I 0.000
MLOC_76271 Hordeum vulgare MLOC_76271 I 0.000
MLOC_79329 Hordeum vulgare MLOC_79329 I 0.000
MLOC_7981 Hordeum vulgare MLOC_7981 I 0.000
MTR_1g033620 Medicago truncatula MTR_1g033620 I 0.000
MTR_2g100930 Medicago truncatula MTR_2g100930 I 0.000
MTR_4g015130 Medicago truncatula MTR_4g015130 I 0.000
MTR_4g107230 Medicago truncatula MTR_4g107230 I 0.000
OB01G15640 Oryza brachyantha OB01G15640 I 0.000
OB01G31400 Oryza brachyantha OB01G31400 I 0.000
OB01G46940 Oryza brachyantha OB01G46940 N 0.000
OB05G35300 Oryza brachyantha OB05G35300 I 0.000
OBART01G21920 Oryza barthii OBART01G21920 I 0.000
OBART04G08050 Oryza barthii OBART04G08050 I 0.000
OBART05G18640 Oryza barthii OBART05G18640 I 0.000
OBART05G27750 Oryza barthii OBART05G27750 I 0.000
OGLUM01G25620 Oryza glumaepatula OGLUM01G25620 I 0.000
OGLUM05G29240 Oryza glumaepatula OGLUM05G29240 I 0.000
OLONG_007893 Oryza longistaminata OLONG_007893 I 0.000
OLONG_027538 Oryza longistaminata OLONG_027538 I 0.000
OMERI01G05960 Oryza meridionalis OMERI01G05960 I 0.000
OMERI01G20200 Oryza meridionalis OMERI01G20200 I 0.000
OMERI05G23670 Oryza meridionalis OMERI05G23670 I 0.000
ONIVA01G25110 Oryza nivara ONIVA01G25110 I 0.000
ONIVA04G06580 Oryza nivara ONIVA04G06580 I 0.000
ONIVA05G29740 Oryza nivara ONIVA05G29740 I 0.000
OPUNC01G22110 Oryza punctata OPUNC01G22110 I 0.000
OPUNC05G25370 Oryza punctata OPUNC05G25370 I 0.000
OPUNC05G25400 Oryza punctata OPUNC05G25400 I 0.000
orange1.1g016477m.g Citrus sinensis orange1.1g016477m.g I 0.000
orange1.1g021351m.g Citrus sinensis orange1.1g021351m.g I 0.000
orange1.1g022562m.g Citrus sinensis orange1.1g022562m.g I 0.000
orange1.1g038601m.g Citrus sinensis orange1.1g038601m.g I 0.000
ORGLA01G0174500 Oryza glaberrima ORGLA01G0174500 I 0.000
ORGLA03G0402100 Oryza glaberrima ORGLA03G0402100 I 0.000
ORGLA05G0241200 Oryza glaberrima ORGLA05G0241200 I 0.000
ORUFI01G24630 Oryza rufipogon ORUFI01G24630 I 0.000
ORUFI05G29720 Oryza rufipogon ORUFI05G29720 I 0.000
OS01G0603300 Oryza sativa OS01G0603300 I 0.000
OS05G0589400 Oryza sativa OS05G0589400 I 0.000
Pavir.Eb00103 Panicum virgatum Pavir.Eb00103 I 0.000
Pavir.J01328 Panicum virgatum Pavir.J01328 I 0.000
Pavir.J35324 Panicum virgatum Pavir.J35324 I 0.000
Pavir.J38363 Panicum virgatum Pavir.J38363 I 0.000
PDK_20s1532501g001 Phoenix dactylifera PDK_20s1532501g001 I 0.000
PDK_20s1665441g001 Phoenix dactylifera PDK_20s1665441g001 N 0.000
PGSC0003DMG400001913 Solanum tuberosum PGSC0003DMG400001913 I 0.000
PGSC0003DMG400009570 Solanum tuberosum PGSC0003DMG400009570 I 0.000
PGSC0003DMG400020344 Solanum tuberosum PGSC0003DMG400020344 I 0.000
PGSC0003DMG400020730 Solanum tuberosum PGSC0003DMG400020730 I 0.000
PGSC0003DMG400024572 Solanum tuberosum PGSC0003DMG400024572 I 0.000
PGSC0003DMG400026442 Solanum tuberosum PGSC0003DMG400026442 I 0.000
PGSC0003DMG400033030 Solanum tuberosum PGSC0003DMG400033030 I 0.000
PK17526.1 Cannabis sativa PK17526.1 D 0.000
PK23829.1 Cannabis sativa PK23829.1 D 0.000
PK29550.1 Cannabis sativa PK29550.1 D 0.000
Pm006358 Prunus mume Pm006358 I 0.000
Pm024648 Prunus mume Pm024648 I 0.000
POPTR_0001s19070 Populus trichocarpa POPTR_0001s19070 I 0.000
POPTR_0001s22660 Populus trichocarpa POPTR_0001s22660 I 0.000
POPTR_0008s19610 Populus trichocarpa POPTR_0008s19610 I 0.000
POPTR_0010s04860 Populus trichocarpa POPTR_0010s04860 I 0.000
PRUPE_ppa008539mg Prunus persica PRUPE_ppa008539mg I 0.000
PRUPE_ppa009283mg Prunus persica PRUPE_ppa009283mg I 0.000
SapurV1A.0002s0030 Salix purpurea SapurV1A.0002s0030 I 0.000
SapurV1A.0007s0060 Salix purpurea SapurV1A.0007s0060 I 0.000
SapurV1A.0113s0280 Salix purpurea SapurV1A.0113s0280 I 0.000
SapurV1A.0408s0140 Salix purpurea SapurV1A.0408s0140 I 0.000
SapurV1A.1882s0030 Salix purpurea SapurV1A.1882s0030 I 0.000
Sb03g003150 Sorghum bicolor Sb03g003150 I 0.000
Sb03g006450 Sorghum bicolor Sb03g006450 I 0.000
Sb09g006060 Sorghum bicolor Sb09g006060 I 0.000
Sb09g030390 Sorghum bicolor Sb09g030390 I 0.000
SELMODRAFT_439294 Selaginella moellendorffii SELMODRAFT_439294 I 0.000
SELMODRAFT_445372 Selaginella moellendorffii SELMODRAFT_445372 I 0.000
SELMODRAFT_84280 Selaginella moellendorffii SELMODRAFT_84280 I 0.000
Si022624m.g Setaria italica Si022624m.g I 0.000
Solyc02g082380.1 Solanum lycopersicum Solyc02g082380.1 I 0.000
Solyc03g113620.2 Solanum lycopersicum Solyc03g113620.2 I 0.000
Solyc04g005100.2 Solanum lycopersicum Solyc04g005100.2 I 0.000
Solyc06g071230.2 Solanum lycopersicum Solyc06g071230.2 I 0.000
Solyc07g026680.2 Solanum lycopersicum Solyc07g026680.2 I 0.000
Solyc12g044610.1 Solanum lycopersicum Solyc12g044610.1 I 0.000
TCM_010118 Theobroma cacao TCM_010118 I 0.000
TCM_013524 Theobroma cacao TCM_013524 I 0.000
TCM_028884 Theobroma cacao TCM_028884 I 0.000
Thhalv10019007m.g Eutrema salsugineum Thhalv10019007m.g I 0.000
Thhalv10020915m.g Eutrema salsugineum Thhalv10020915m.g I 0.000
TRAES3BF053400010CFD_g Triticum aestivum TRAES3BF053400010CFD_g I 0.000
TRAES3BF110700030CFD_g Triticum aestivum TRAES3BF110700030CFD_g I 0.000
TRAES3BF186800050CFD_g Triticum aestivum TRAES3BF186800050CFD_g I 0.000
Traes_1AL_01E24503F Triticum aestivum Traes_1AL_01E24503F I 0.000
Traes_1AL_1360F98E7 Triticum aestivum Traes_1AL_1360F98E7 N 0.000
Traes_1BL_1B12D7856 Triticum aestivum Traes_1BL_1B12D7856 I 0.000
Traes_2AL_C13CD3ECB Triticum aestivum Traes_2AL_C13CD3ECB I 0.000
Traes_3AL_55A3F252C Triticum aestivum Traes_3AL_55A3F252C I 0.000
Traes_3AL_891566958 Triticum aestivum Traes_3AL_891566958 I 0.000
Traes_3AS_6626D4A69 Triticum aestivum Traes_3AS_6626D4A69 I 0.000
Traes_3AS_965E2F790 Triticum aestivum Traes_3AS_965E2F790 I 0.000
Traes_3DL_F1DB969A8 Triticum aestivum Traes_3DL_F1DB969A8 I 0.000
Traes_3DS_61692C8F3 Triticum aestivum Traes_3DS_61692C8F3 I 0.000
Traes_3DS_8AF1A10AB Triticum aestivum Traes_3DS_8AF1A10AB I 0.000
Traes_3DS_DF23FE973 Triticum aestivum Traes_3DS_DF23FE973 I 0.000
Traes_7DS_C6BEE3896 Triticum aestivum Traes_7DS_C6BEE3896 I 0.000
TRIUR3_09932 Triticum urartu TRIUR3_09932 I 0.000
TRIUR3_12855 Triticum urartu TRIUR3_12855 I 0.000
TRIUR3_18966 Triticum urartu TRIUR3_18966 I 0.000
TRIUR3_30912 Triticum urartu TRIUR3_30912 I 0.000
VIT_01s0026g01050 Vitis vinifera VIT_01s0026g01050 I 0.000
VIT_04s0008g00900 Vitis vinifera VIT_04s0008g00900 I 0.000
VIT_17s0000g07510 Vitis vinifera VIT_17s0000g07510 I 0.000