CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R000202
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R000202
T135644_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB20
M04599_2.00
Homo sapiens
NVYATACRTYVN
NBRAYGTATRBN
SELEX
Yin et al.(2017)
ZBTB20_eDBD_HT-SELEX
0.783
0.991
ZBTB20
M04600_2.00
Homo sapiens
NVYATACRTTNN
NNAAYGTATRBN
SELEX
Yin et al.(2017)
ZBTB20_eDBD_Methyl-HT-SELEX
0.783
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R000202
C2H2 ZF
577
599
YECTLCNKTFTAKQNYVKHMFVH
Gfo_R000202
C2H2 ZF
605
627
HQCSICWRSFSLKDYLIKHMVTH
Gfo_R000202
C2H2 ZF
633
655
YQCSICNKRFTQKSSLNVHMRLH
Gfo_R000202
C2H2 ZF
661
683
YECYICKKKFSHKTLLERHVALH
Gfo_R000202
C2H2 ZF
713
735
YVCSVCPAKFDQIEHFNDHMRMH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy