CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R013938
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R013938
T135858_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R013938
C2H2 ZF
139
162
HACPNCESSFASQEILAEHLQTLH
Gfo_R013938
C2H2 ZF
171
192
FKCRNCGKKFPVKQALQRHVLQ
Gfo_R013938
C2H2 ZF
206
226
FQCSVCNTAFSSESSYEQHKE
Gfo_R013938
C2H2 ZF
234
259
FICKADSCGKRFKSKDALKKHKENVH
Gfo_R013938
C2H2 ZF
267
289
LMCSVCNKKCSSAANLQEHRKVH
Gfo_R013938
C2H2 ZF
292
314
FECQECDKKFISANQLKRHMITH
Gfo_R013938
C2H2 ZF
320
342
YTCEVCNKSFKRLDQVTAHKIIH
Gfo_R013938
C2H2 ZF
348
370
YKCKLCGKGFAHRNVYKNHKKTH
Gfo_R013938
C2H2 ZF
376
398
FQCEECKALFRTPFSLQRHLLIH
Gfo_R013938
C2H2 ZF
404
427
FKCDHCDATFKRKDTLNVHIQVVH
Gfo_R013938
C2H2 ZF
433
455
YKCDLCDKAFVTPSVLKSHKKTH
Gfo_R013938
C2H2 ZF
462
483
ICPYCGQKFASNGTLRVHIRSH
Gfo_R013938
C2H2 ZF
489
511
YQCPYCDKAFSKNDGLKMHIRTH
Gfo_R013938
C2H2 ZF
517
539
YQCSECNKAFSQKRGLDEHMRTH
Gfo_R013938
C2H2 ZF
545
567
FQCDVCDLSFSLKKMLIRHKLTH
Gfo_R013938
C2H2 ZF
575
597
ECQLCHKKFTRNDYLKVHMENVH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy