CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_ZNF41_10006078
(
Myotis brandtii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Myotis_brandtii_ZNF41_10006078
T136315_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF41
M08245_2.00
Homo sapiens
TGGTGNYBNDYTYCC
GGRARHNVRNCACCA
ChIP-seq
Najafabadi et al.(2015b)
ZNF41
0.759
0.907
ZNF41
M08313_2.00
Homo sapiens
NNNNNBTBNCTCATKGTSYYNNNYTYCCYT
NRMARGGRARNNNRRSACMATGAGNVAVNN
ChIP-seq
Schmitges et al.(2016)
P51814_4-14.RCADE
0.759
0.907
ZNF41
M08896_2.00
Homo sapiens
YTSATKGTGBYYNDYTYCCYTGTK
MACARGGRARHNRRVCACMATSAR
Misc
Kulakovskiy et al.(2013)
ZNF41_HUMAN.H11MO.0.C
0.759
0.907
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
405
427
YVCTEYIKNFTQKSDLFEHQKIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
461
483
YICTQCGKAFTLKSNLITHQKIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
489
511
YKCSECGKAFSHRSYLFRHMRIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
517
539
YECSECGRGFSQNSDLNMHQKTH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
545
567
YACSECGKAFTRKSALRMHQRIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
573
595
YVCTECGKAFIQKSHFNTHQRIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
601
623
YECGDCGKSFTKKSQLHVHRRIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
629
651
YICAECGKVFTHRTNLTTHQKTH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
657
679
YTCAECGKAFSDQSNLIKHQKTH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
685
707
YKCNGCGKAFIWKSRLTIHQKSH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
713
735
YECNECGKAFIQKSTLSVHQRIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
741
763
YVCPDCGKAFIQKSHFIAHHRIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
769
791
YECSDCGKCFTKKSQLRVHQKIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
798
819
ICAECGKAFTDRSNLITHQKIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
825
847
YQCSDCGKTFTWKSRLTIHQKSH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
853
875
YECSKCGKAFIQKATLNMHQIIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
881
903
YACTECRKAFTNRSNLIKHQKTH
Links
Other
C2H2 ZF
family TFs
Other
Myotis brandtii
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy