CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_Znf653_10003855
(
Myotis brandtii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Myotis_brandtii_Znf653_10003855
T136413_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF653
M08248_2.00
Homo sapiens
NWTTHNYDHCYKCCGACWNHWAWD
HWTWDNWGTCGGMRGDHRNDAAWN
ChIP-seq
Najafabadi et al.(2015b)
ZNF653
0.825
0.983
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_Znf653_10003855
C2H2 ZF
385
410
FHCPYEGCSQVYVALSSFQNHVNLVH
Myotis_brandtii_Znf653_10003855
C2H2 ZF
416
440
KVCPHPGCGKKFYLSNHLRRHMIIH
Myotis_brandtii_Znf653_10003855
C2H2 ZF
446
468
FTCETCGKSFKRKNHLEVHRRTH
Myotis_brandtii_Znf653_10003855
C2H2 ZF
474
496
LQCEICGYQCRQRASLNWHMKKH
Myotis_brandtii_Znf653_10003855
C2H2 ZF
504
527
FTCERCGKRFEKLDSIKFHTLKSH
Links
Other
C2H2 ZF
family TFs
Other
Myotis brandtii
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy