Ogr11440 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr11440 T136664_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zbtb12
M00146_2.00
Mus musculus
NGTTCTARRN

NYYTAGAACN
PBM
Badis et al.(2009)
Zbtb12_2932
0.824 0.971
ZBTB12
M04633_2.00
Homo sapiens
RGCTGRRCCGCGYN

NRCGCGGYYCAGCY
SELEX
Yin et al.(2017)
ZBTB12_eDBD_HT-SELEX_1
0.824 0.971
ZBTB12
M04634_2.00
Homo sapiens
AVGACGGCAGGCCB

VGGCCTGCCGTCBT
SELEX
Yin et al.(2017)
ZBTB12_eDBD_HT-SELEX_2
0.824 0.971
ZBTB12
M08389_2.00
Homo sapiens
CTAGAACMB

VKGTTCTAG
ChIP-seq
Schmitges et al.(2016)
Q9Y330_1-3.RCADE
0.824 0.971
ZBTB12
M08269_2.00
Homo sapiens
NNRDTCTAGAACVYNNN

NNNRBGTTCTAGAHYNN
ChIP-seq
Najafabadi et al.(2015b)
ZBTB12
0.824 0.971
ZBTB12
M04635_2.00
Homo sapiens
AGCTGRRCCGCGYN

NRCGCGGYYCAGCT
SELEX
Yin et al.(2017)
ZBTB12_eDBD_Methyl-HT-SELEX_1
0.824 0.971
ZBTB12
M04636_2.00
Homo sapiens
RMGACGDCAGGCCW

WGGCCTGHCGTCKY
SELEX
Yin et al.(2017)
ZBTB12_eDBD_Methyl-HT-SELEX_2
0.824 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr11440 C2H2 ZF 257 279
Ogr11440 C2H2 ZF 285 307
Ogr11440 C2H2 ZF 313 336

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZBTB12 Anolis carolinensis ENSACAG00000011189 I 0.827
Pvit_00817 Pogona vitticeps Pvit_00817 I 0.827
Zbtb12 Rattus norvegicus ENSRNOG00000000418 I 0.824
ZBTB12 Pteropus vampyrus ENSPVAG00000005130 I 0.824
ZBTB12 Pan troglodytes ENSPTRG00000017993 I 0.824
ENSSHAG00000008383 Sarcophilus harrisii ENSSHAG00000008383 I 0.824
ENSPANG00000003484 Papio anubis ENSPANG00000003484 I 0.824
ZBTB12 Sus scrofa ENSSSCG00000001421 I 0.824
XP_002943018 Xenopus tropicalis XP_002943018 I 0.824
zbtb12.L Xenopus laevis XB-GENE-865454 I 0.824
Myotis_brandtii_ZBTB12_10007235 Myotis brandtii Myotis_brandtii_ZBTB12_10007235 I 0.824
ENSSTOG00000027411 Ictidomys tridecemlineatus ENSSTOG00000027411 I 0.824
ZBTB12 Otolemur garnettii ENSOGAG00000031042 I 0.824
Zbtb12 Mus musculus ENSMUSG00000049823 D 0.824
ZBTB12 Felis catus ENSFCAG00000031296 I 0.824
ZBTB12 Canis familiaris ENSCAFG00000000674 I 0.824
ZBTB12 Bos taurus ENSBTAG00000032031 I 0.824
ENSAMEG00000012921 Ailuropoda melanoleuca ENSAMEG00000012921 I 0.824
ZBTB12 Homo sapiens ENSG00000204366 D 0.824
ENSGGOG00000015638 Gorilla gorilla ENSGGOG00000015638 I 0.824
ZBTB12 Macaca mulatta ENSMMUG00000011683 I 0.824
ZBTB12 Microcebus murinus ENSMICG00000003600 I 0.824
ENSMPUG00000018357 Mustela putorius furo ENSMPUG00000018357 I 0.824
ENSMODG00000015096 Monodelphis domestica ENSMODG00000015096 I 0.824
Alligator_sinensis_CCG007024.1 Alligator sinensis Alligator_sinensis_CCG007024.1 I 0.820
ENSLACG00000006007 Latimeria chalumnae ENSLACG00000006007 I 0.814