Tal_R008892 (Tyto alba)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Tal_R008892 T137669_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PATZ1
M08287_2.00
Homo sapiens
CCCCDCCC

GGGHGGGG
ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME
0.825 0.993
PATZ1
M08864_2.00
Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY

RKGGVRGRGRMKGVRVNDGVRN
Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C
0.825 0.993
PATZ1
M10137_2.00
Homo sapiens
NDDCCCCCCCCSH

DSGGGGGGGGHHN
Transfac
Matys et al.(2006)
V$MAZR_01
0.825 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R008892 C2H2 ZF 148 170
Tal_R008892 C2H2 ZF 212 233
Tal_R008892 C2H2 ZF 239 261
Tal_R008892 C2H2 ZF 269 292
Tal_R008892 C2H2 ZF 298 320
Tal_R008892 C2H2 ZF 352 374

Links

Other C2H2 ZF family TFs
Other Tyto alba TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action