CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.236.5.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw.236.5.1
T138076_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.236.5.1
C2H2 ZF
13
34
LKCKLCTSTFCDAETLQAHTAS
e_gw.236.5.1
C2H2 ZF
41
63
FKCEVCDKRFLLKHHLKQHLLTH
e_gw.236.5.1
C2H2 ZF
69
91
YLCGQCSRRFTRSSDLKNHLRVH
e_gw.236.5.1
C2H2 ZF
97
119
YQCAQCDMAFCQQGDLKRHIFTH
e_gw.236.5.1
C2H2 ZF
125
147
HKCMECPKQFSVATALAEHMRTH
e_gw.236.5.1
C2H2 ZF
153
175
YSCNSCSKQFSRLGDLKQHTRTH
e_gw.236.5.1
C2H2 ZF
181
203
FTCNVCDKSFTWRIDLTRHKRTH
e_gw.236.5.1
C2H2 ZF
209
231
YQCDVCNKRFSVMSTLASHKRSH
e_gw.236.5.1
C2H2 ZF
237
259
YQCQECRKRFTQLSRLKDHVRIH
e_gw.236.5.1
C2H2 ZF
265
287
YKCGVCEKSFTRLGHLQQHTLVH
e_gw.236.5.1
C2H2 ZF
293
315
FSCEQCKKTFAQMSDLKRHIRAH
e_gw.236.5.1
C2H2 ZF
321
343
YACDRCPKQFSLLDSLKEHMRTH
e_gw.236.5.1
C2H2 ZF
349
371
HTCPECHKQFTQNGSLVEHMRKH
e_gw.236.5.1
C2H2 ZF
377
399
YECDECGKKFARLNGVKQHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw.374.2.1
Branchiostoma floridae
e_gw.374.2.1
N
0.820