CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.374.2.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw.374.2.1
T138235_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.374.2.1
C2H2 ZF
16
37
FKCKLCTSTFCDAETLQAHTAS
e_gw.374.2.1
C2H2 ZF
44
66
FKCEVCDKRFLLKHHLKQHLLTH
e_gw.374.2.1
C2H2 ZF
72
94
YLCSQCRRRFTRSSDLKNHLRVH
e_gw.374.2.1
C2H2 ZF
100
122
YQCAQCDMAFCQQGDLKRHIFTH
e_gw.374.2.1
C2H2 ZF
128
150
HKCTECPKQFSVATALAEHMRIH
e_gw.374.2.1
C2H2 ZF
156
178
YSCISCSKQFSRLGDLKQHMRTH
e_gw.374.2.1
C2H2 ZF
184
206
FTCNVCDKSFTWRIDLTRHKRTH
e_gw.374.2.1
C2H2 ZF
212
234
YQCDVCNKRFSVMSTLASHKRSH
e_gw.374.2.1
C2H2 ZF
240
262
YQCQECRKRFTQLSRLKDHVRIH
e_gw.374.2.1
C2H2 ZF
268
290
YKCGVCEKSFTRLGHLQQHTLVH
e_gw.374.2.1
C2H2 ZF
296
318
FSCEQCKKTFAQMSDLKRHIRAH
e_gw.374.2.1
C2H2 ZF
324
346
YACDRCPKQFSLLDSLKEHMRTH
e_gw.374.2.1
C2H2 ZF
352
374
HTCPECHKQFTQNGSLVEHMRKH
e_gw.374.2.1
C2H2 ZF
380
402
YGCDECGKKFARLNGVKQHIKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw.236.5.1
Branchiostoma floridae
e_gw.236.5.1
N
0.820