CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.442.1.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw.442.1.1
T138283_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.442.1.1
C2H2 ZF
3
25
HKCPQCGYQTDMKSAMTKHLRIH
e_gw.442.1.1
C2H2 ZF
60
83
YVCGHCGYATADKYVLLSHVRTIH
e_gw.442.1.1
C2H2 ZF
89
112
YQCAICDYSAAKKCNLESHIMAKH
e_gw.442.1.1
C2H2 ZF
118
140
HKCTECDFSSVSKKNLKFHMANH
e_gw.442.1.1
C2H2 ZF
146
168
YKCKICDYSTIQKQHLKQHMAIH
e_gw.442.1.1
C2H2 ZF
174
196
YKCKICDYSAAEQCNLKRHMLKH
e_gw.442.1.1
C2H2 ZF
202
224
YKCNKCDYSATQMSHLKLHMSKH
e_gw.442.1.1
C2H2 ZF
230
252
FKCDQCDYSAAVKSSLKLHMTTH
e_gw.442.1.1
C2H2 ZF
258
280
YKCGLCDYSASQMPHLKLHMVKH
e_gw.442.1.1
C2H2 ZF
286
308
FKCHVCDYSTAIKSALRQHMYKH
e_gw.442.1.1
C2H2 ZF
314
336
YKCGICAHSATRMSHLKRHMVTH
e_gw.442.1.1
C2H2 ZF
342
364
YKCDVCDFAAAEMSDLKQHKFKH
e_gw.442.1.1
C2H2 ZF
370
392
YKCELCDYSATRLYNLKRHVERH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_pg.scaffold_37000202
Branchiostoma floridae
fgenesh2_pg.scaffold_37000202
N
0.827