fgenesh1_pg.sca_18_chr2_1_0000868 (Nectria haematococca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 fgenesh1_pg.sca_18_chr2_1_0000868 T139024_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03184
M01474_2.00 		Neurospora crassa
NDNNVATCNN
NNGATBNNHN		 PBM
Najafabadi et al.(2015a)
pTH10252 		0.822 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.sca_18_chr2_1_0000868 C2H2 ZF 244 266
fgenesh1_pg.sca_18_chr2_1_0000868 C2H2 ZF 272 297

Links

Other C2H2 ZF family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action