Sakowv30043351m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30043351m.g T142488_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
esg
M06050_2.00
Drosophila melanogaster
CACCTGH

DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.790 0.850
SNAI2
M00221_2.00
Homo sapiens
HACYTGH

DCARGTD
PBM
Barrera et al.(2016)
SNAI2_REF
0.764 0.858
SNAI2
M02873_2.00
Homo sapiens
VCACCTGYN

NRCAGGTGB
SELEX
Jolma et al.(2013)
SNAI2_1
0.764 0.858
SNAI2
M04392_2.00
Homo sapiens
YGCACCTGYY

RRCAGGTGCR
SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX
0.764 0.858
SNAI2
M04394_2.00
Homo sapiens
YRCACCTGYY

RRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX
0.764 0.858
SNAI2
M08853_2.00
Homo sapiens
NVCACCTGYY

RRCAGGTGBN
Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A
0.764 0.858
Snai2
M08973_2.00
Mus musculus
VNRCACCTGYY

RRCAGGTGYNB
Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A
0.764 0.858
SNAI2
M10102_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6_01
0.764 0.858
SNAI2
M10103_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6_02
0.764 0.858
SNAI2
M10104_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6
0.764 0.858
SNAI2
M00220_2.00
Homo sapiens
NHACCTGY

RCAGGTDN
PBM
Barrera et al.(2016)
SNAI2_D119E
0.764 0.858
SNAI2
M04393_2.00
Homo sapiens
YRCACCTGYN

NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX
0.764 0.858
SNAI2
M04395_2.00
Homo sapiens
YRCACCTGYN

NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX
0.764 0.858
SNAI2
M00222_2.00
Homo sapiens
HACYTGHNNN

NNNDCARGTD
PBM
Barrera et al.(2016)
SNAI2_T234I
0.760 0.850
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23954104_peptide C2H2 ZF 145 167
23954104_peptide C2H2 ZF 176 198
23954104_peptide C2H2 ZF 202 224
23954104_peptide C2H2 ZF 230 252
23954104_peptide C2H2 ZF 258 278

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAB34088 Xenopus laevis AAB34088 I 0.764
AAK54135 Xenopus tropicalis AAK54135 I 0.764
AAK54137 Xenopus laevis AAK54137 I 0.764
AAK54139 Xenopus laevis AAK54139 I 0.764
Aan_R012932 Calypte anna Aan_R012932 I 0.764
ACEP13085 Atta cephalotes ACEP13085 I 0.766
Afo_R005870 Aptenodytes forsteri Afo_R005870 I 0.764
Alligator_sinensis_CCG016283.1 Alligator sinensis Alligator_sinensis_CCG016283.1 I 0.764
Brh_R006038 Buceros rhinoceros Brh_R006038 I 0.764
CapteG76255 Capitella teleta CapteG76255 I 0.775
Cflo_07707--XP_393944.1_APIME Camponotus floridanus Cflo_07707--XP_393944.1_APIME I 0.757
CGI_10027813 Crassostrea gigas CGI_10027813 I 0.775
CLEC007039 Cimex lectularius CLEC007039 I 0.766
SNAI2 Anolis carolinensis ENSACAG00000012332 I 0.764
ENSAMEG00000009606 Ailuropoda melanoleuca ENSAMEG00000009606 I 0.764
ENSAPLG00000003920 Anas platyrhynchos ENSAPLG00000003920 I 0.764
SNAI2 Bos taurus ENSBTAG00000013227 I 0.766
SNAI2 Canis familiaris ENSCAFG00000006638 I 0.764
SNAI2 Choloepus hoffmanni ENSCHOG00000007046 I 0.764
SNAI2 Callithrix jacchus ENSCJAG00000013499 I 0.764
ENSCPOG00000014827 Cavia porcellus ENSCPOG00000014827 I 0.764
ENSCSAG00000014787 Chlorocebus sabaeus ENSCSAG00000014787 I 0.764
SNAI2 Dasypus novemcinctus ENSDNOG00000035997 I 0.764
SNAI2 Equus caballus ENSECAG00000010120 I 0.764
ENSFALG00000005762 Ficedula albicollis ENSFALG00000005762 I 0.764
SNAI2 Felis catus ENSFCAG00000015779 I 0.764
SNAI2 Homo sapiens ENSG00000019549 D 0.764
ENSGALG00000015241 Gallus gallus ENSGALG00000015241 I 0.764
SNAI2 Gorilla gorilla ENSGGOG00000000959 I 0.764
ENSLACG00000004705 Latimeria chalumnae ENSLACG00000004705 I 0.760
ENSLACG00000005413 Latimeria chalumnae ENSLACG00000005413 I 0.764
SNAI2 Loxodonta africana ENSLAFG00000009299 I 0.764
ENSMEUG00000009510 Macropus eugenii ENSMEUG00000009510 I 0.767
SNAI2 Meleagris gallopavo ENSMGAG00000010813 I 0.764
SNAI2 Microcebus murinus ENSMICG00000000335 I 0.764
SNAI2 Myotis lucifugus ENSMLUG00000001086 I 0.764
SNAI2 Macaca mulatta ENSMMUG00000016195 I 0.764
SNAI2 Monodelphis domestica ENSMODG00000010173 I 0.764
ENSMPUG00000010793 Mustela putorius furo ENSMPUG00000010793 I 0.764
Snai2 Mus musculus ENSMUSG00000022676 D 0.764
ENSNLEG00000013421 Nomascus leucogenys ENSNLEG00000013421 I 0.764
SNAI2 Ornithorhynchus anatinus ENSOANG00000007267 I 0.764
ENSOARG00000013030 Ovis aries ENSOARG00000013030 I 0.766
SNAI2 Oryctolagus cuniculus ENSOCUG00000012254 I 0.764
SNAI2 Otolemur garnettii ENSOGAG00000010500 I 0.764
ENSP00000020945-D1 Bos grunniens ENSP00000020945-D1 I 0.766
ENSP00000380034 Macaca fascicularis ENSP00000380034 I 0.764
ENSPANG00000017540 Papio anubis ENSPANG00000017540 I 0.764
SNAI2 Procavia capensis ENSPCAG00000001788 I 0.764
ENSPPYG00000018578 Pongo abelii ENSPPYG00000018578 I 0.764
ENSPSIG00000016395 Pelodiscus sinensis ENSPSIG00000016395 I 0.764
SNAI2 Pan troglodytes ENSPTRG00000020235 I 0.764
SNAI2 Pteropus vampyrus ENSPVAG00000009457 I 0.764
Snai2 Rattus norvegicus ENSRNOG00000047699 I 0.764
ENSSHAG00000004205 Sarcophilus harrisii ENSSHAG00000004205 I 0.764
ENSSSCG00000024404 Sus scrofa ENSSSCG00000024404 I 0.764
ENSSSCG00000026570 Sus scrofa ENSSSCG00000026570 I 0.764
ENSSTOG00000028743 Ictidomys tridecemlineatus ENSSTOG00000028743 I 0.764
SNAI2 Taeniopygia guttata ENSTGUG00000010914 I 0.764
estExt_fgenesh2_kg.C_190001 Branchiostoma floridae estExt_fgenesh2_kg.C_190001 I 0.785
esg Drosophila melanogaster FBgn0001981 D 0.790
GA17666 Drosophila pseudoobscura FBgn0077676 I 0.790
GF15382 Drosophila ananassae FBgn0092407 I 0.790
GG25158 Drosophila erecta FBgn0117283 I 0.790
GH13754 Drosophila grimshawi FBgn0121230 I 0.788
GI17894 Drosophila mojavensis FBgn0140635 I 0.788
GL26425 Drosophila persimilis FBgn0164007 I 0.790
GD24004 Drosophila simulans FBgn0195364 I 0.790
GJ17399 Drosophila virilis FBgn0204571 I 0.788
GK18133 Drosophila willistoni FBgn0220132 I 0.788
GE20968 Drosophila yakuba FBgn0238253 I 0.790
Gfo_R012649 Geospiza fortis Gfo_R012649 I 0.764
HHAL006775-PA Halyomorpha halys HHAL006775-PA I 0.766
HMEL002306 Heliconius melpomene HMEL002306 I 0.757
L798_10614 Zootermopsis nevadensis L798_10614 I 0.765
LCUP013268 Lucilia cuprina LCUP013268 I 0.790
LDEC001157 Leptinotarsa decemlineata LDEC001157 I 0.789
LotgiG114290 Lottia gigantea LotgiG114290 I 0.759
MDOA014024 Musca domestica MDOA014024 I 0.790
Myotis_brandtii_Snai2_10018131 Myotis brandtii Myotis_brandtii_Snai2_10018131 I 0.764
NV17743 Nasonia vitripennis NV17743 I 0.759
Ogr04681 Ophisaurus gracilis Ogr04681 I 0.764
PHUM091060 Pediculus humanus PHUM091060 I 0.764
PPAI008011 Phlebotomus papatasi PPAI008011 I 0.781
Pvit_15376 Pogona vitticeps Pvit_15376 I 0.764
RPRC005707 Rhodnius prolixus RPRC005707 I 0.758
SINV14155 Solenopsis invicta SINV14155 I 0.766
SMAR001314 Strigamia maritima SMAR001314 I 0.765
SMAR001730 Strigamia maritima SMAR001730 I 0.770
Tal_R003673 Tyto alba Tal_R003673 I 0.764
TC014474 Tribolium castaneum TC014474 I 0.787
tetur13g00760 Tetranychus urticae tetur13g00760 I 0.770
snai2 Xenopus tropicalis XB-GENE-487371 I 0.764
snai2.L Xenopus laevis XB-GENE-6255814 I 0.764
snai2.S Xenopus laevis XB-GENE-865699 I 0.764
YQE_07640 Dendroctonus ponderosae YQE_07640 I 0.776