Sakowv30043351m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30043351m.g T142488_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
esg
M06050_2.00
Drosophila melanogaster
CACCTGH

DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.790 0.850
SNAI2
M00221_2.00
Homo sapiens
HACYTGH

DCARGTD
PBM
Barrera et al.(2016)
SNAI2_REF
0.764 0.858
SNAI2
M02873_2.00
Homo sapiens
VCACCTGYN

NRCAGGTGB
SELEX
Jolma et al.(2013)
SNAI2_1
0.764 0.858
SNAI2
M04392_2.00
Homo sapiens
YGCACCTGYY

RRCAGGTGCR
SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX
0.764 0.858
SNAI2
M04394_2.00
Homo sapiens
YRCACCTGYY

RRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX
0.764 0.858
SNAI2
M08853_2.00
Homo sapiens
NVCACCTGYY

RRCAGGTGBN
Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A
0.764 0.858
Snai2
M08973_2.00
Mus musculus
VNRCACCTGYY

RRCAGGTGYNB
Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A
0.764 0.858
SNAI2
M10102_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6_01
0.764 0.858
SNAI2
M10103_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6_02
0.764 0.858
SNAI2
M10104_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6
0.764 0.858
SNAI2
M00220_2.00
Homo sapiens
NHACCTGY

RCAGGTDN
PBM
Barrera et al.(2016)
SNAI2_D119E
0.764 0.858
SNAI2
M04393_2.00
Homo sapiens
YRCACCTGYN

NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX
0.764 0.858
SNAI2
M04395_2.00
Homo sapiens
YRCACCTGYN

NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX
0.764 0.858
SNAI2
M00222_2.00
Homo sapiens
HACYTGHNNN

NNNDCARGTD
PBM
Barrera et al.(2016)
SNAI2_T234I
0.760 0.850
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23954104_peptide C2H2 ZF 145 167
23954104_peptide C2H2 ZF 176 198
23954104_peptide C2H2 ZF 202 224
23954104_peptide C2H2 ZF 230 252
23954104_peptide C2H2 ZF 258 278

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
FGRRES_17238 Fusarium graminearum FGRRES_17238 D 0.000
PV08_11364 Exophiala spinifera PV08_11364 I 0.000
PV07_11936 Cladophialophora immunda PV07_11936 I 0.000
PV06_02589 Exophiala oligosperma PV06_02589 I 0.000
Z519_05358 Cladophialophora bantiana Z519_05358 I 0.000
PV05_09089 Exophiala xenobiotica PV05_09089 I 0.000
PV04_08189 Capronia semiimmersa PV04_08189 I 0.000
OIDMADRAFT_141009 Oidiodendron maius OIDMADRAFT_141009 I 0.000
MAPG_01731 Magnaporthe poae MAPG_01731 I 0.000
PV11_06331 Exophiala sideris PV11_06331 I 0.000
SBOR_4183 Sclerotinia borealis SBOR_4183 I 0.000
SPBR_00057 Sporothrix brasiliensis SPBR_00057 I 0.000
Z518_06732 Rhinocladiella mackenziei Z518_06732 I 0.000
Z517_03357 Fonsecaea pedrosoi Z517_03357 I 0.000
VHEMI03354 Torrubiella hemipterigena VHEMI03354 I 0.000
VDBG_00856 Verticillium alfalfae VDBG_00856 I 0.000
VDAG_00465 Verticillium dahliae VDAG_00465 I 0.000
UV8b_5932 Ustilaginoidea virens UV8b_5932 I 0.000
TRIREDRAFT_119826 Trichoderma reesei TRIREDRAFT_119826 I 0.000
SS1G_03098 Sclerotinia sclerotiorum SS1G_03098 I 0.000
HMPREF1624_05953 Sporothrix schenckii HMPREF1624_05953 I 0.000
HMPREF1120_01670 Exophiala dermatitidis HMPREF1120_01670 I 0.000
GLRG_08361 Colletotrichum graminicola GLRG_08361 I 0.000
CMQ_3175 Grosmannia clavigera CMQ_3175 I 0.000
CH063_05452 Colletotrichum higginsianum CH063_05452 I 0.000
CGGC5_14308 Colletotrichum gloeosporioides CGGC5_14308 I 0.000
Bcin06g06480 Botrytis cinerea Bcin06g06480 I 0.000
ACRE_004430 Acremonium chrysogenum ACRE_004430 I 0.000
A1O9_01966 Exophiala aquamarina A1O9_01966 I 0.000
A1O7_07701 Cladophialophora yegresii A1O7_07701 I 0.000
A1O5_09249 Cladophialophora psammophila A1O5_09249 I 0.000
A1O1_04664 Capronia coronata A1O1_04664 I 0.000
CSUB01_02000 Colletotrichum sublineola CSUB01_02000 I 0.000
EPUS_00089 Endocarpon pusillum EPUS_00089 I 0.000
GGTG_02769 Gaeumannomyces graminis GGTG_02769 I 0.000
G647_02381 Cladophialophora carrionii G647_02381 I 0.000
VDBG_00856 Verticillium albo atrum VDBG_00856 I 0.000
FVEG_04119 Fusarium verticillioides FVEG_04119 I 0.000
FOXG_05651 Fusarium oxysporum FOXG_05651 I 0.000
FFUJ_04435 Fusarium fujikuroi FFUJ_04435 I 0.000
F503_02949 Ophiostoma piceae uamh F503_02949 I 0.000
PITC_097210 Penicillium italicum PITC_097210 N 0.000
PAAG_02161 Paracoccidioides sp lutzii PAAG_02161 N 0.000
A1O3_06687 Capronia epimyces A1O3_06687 N 0.000
PEX1_081420 Penicillium expansum PEX1_081420 N 0.000