Bostr.3877s0062 (Boechera stricta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Bostr.3877s0062 T142620_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YY1
M01443_2.00 		Arabidopsis thaliana
NNNVCWYNN
NNRWGBNNN		 PBM
Najafabadi et al.(2015a)
pTH11160 		0.818 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.3877s0062.1.p C2H2 ZF 79 103
Bostr.3877s0062.1.p C2H2 ZF 108 132
Bostr.3877s0062.1.p C2H2 ZF 138 162
Bostr.3877s0062.1.p C2H2 ZF 168 193
Bostr.3877s0062.1.p C2H2 ZF 230 255

Links

Other C2H2 ZF family TFs
Other Boechera stricta TFs

Invalid Input OrderBy

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action