Carubv10022259m.g (Capsella rubella)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Carubv10022259m.g T142738_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10022259m C2H2 ZF 21 44
Carubv10022259m C2H2 ZF 67 89
Carubv10022259m C2H2 ZF 95 119
Carubv10022259m C2H2 ZF 124 149
Carubv10022259m C2H2 ZF 204 228
Carubv10022259m C2H2 ZF 237 261
Carubv10022259m C2H2 ZF 294 319

Links

Other C2H2 ZF family TFs
Other Capsella rubella TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.4006s0023 Capsella grandiflora Cagra.4006s0023 N 0.827
TFIIIA Arabidopsis lyrata fgenesh2_kg.2__1466__AT1G72050.2 N 0.813
Bostr.10273s0148 Boechera stricta Bostr.10273s0148 N 0.801
Thhalv10018661m.g Eutrema salsugineum Thhalv10018661m.g N 0.798
Bra008004 Brassica rapa Bra008004 N 0.789
Bra003899 Brassica rapa Bra003899 N 0.771