Thhalv10005323m.g (Eutrema salsugineum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Thhalv10005323m.g T143532_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10005323m C2H2 ZF 207 229
Thhalv10005323m C2H2 ZF 256 278

Links

Other C2H2 ZF family TFs
Other Eutrema salsugineum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT5G61470 Arabidopsis thaliana AT5G61470 N 0.765
Bostr.26833s0090 Boechera stricta Bostr.26833s0090 N 0.768
Bostr.26675s0176 Boechera stricta Bostr.26675s0176 I 0.766
Bo7g098740 Brassica oleracea Bo7g098740 N 0.792
Bo1g081350 Brassica oleracea Bo1g081350 I 0.777
Bra012914 Brassica rapa Bra012914 I 0.777
Bra012953 Brassica rapa Bra012953 N 0.792
Bra029985 Brassica rapa Bra029985 I 0.777
Bra018817 Brassica rapa Bra018817 I 0.771
Cla001400 Citrullus lanatus Cla001400 I 0.782
Ciclev10007101m.g Citrus clementina Ciclev10007101m.g I 0.777
Thhalv10010909m.g Eutrema salsugineum Thhalv10010909m.g I 0.777
Gorai.005G232300 Gossypium raimondii Gorai.005G232300 I 0.765
Lus10038929.g Linum usitatissimum Lus10038929.g N 0.762
cassava32957.m1 Manihot esculenta cassava32957.m1 I 0.766
cassava47027.m1 Manihot esculenta cassava47027.m1 N 0.762
cassava21316.m1 Manihot esculenta cassava21316.m1 I 0.786
POPTR_0001s00800 Populus trichocarpa POPTR_0001s00800 I 0.787
30147.m014242 Ricinus communis 30147.m014242 I 0.787
SapurV1A.1544s0070 Salix purpurea SapurV1A.1544s0070 I 0.786
SapurV1A.1944s0060 Salix purpurea SapurV1A.1944s0060 I 0.786