CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Scas_Contig568.5
(
Saccharomyces castellii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Scas_Contig568.5
T144948_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MET31
M00040_2.00
Saccharomyces cerevisiae
NNHCACCTMN
NKAGGTGDNN
PBM
Badis et al.(2008)
MET31_2146
0.782
0.822
MET31
M07470_2.00
Saccharomyces cerevisiae
MGCCACNNH
DNNGTGGCK
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0333.1
0.782
0.822
MET31
M08543_2.00
Saccharomyces cerevisiae
VCACWVYK
MRBWGTGB
Misc
DeBoer et al.(2011)
YPL038W_1370
0.782
0.822
MET31
M10402_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MET31_01
0.782
0.822
MET32
M00022_2.00
Saccharomyces cerevisiae
NVMGCCACAV
BTGTGGCKBN
PBM
Badis et al.(2008)
MET32_2153
0.773
0.756
MET32
M01528_2.00
Saccharomyces cerevisiae
MGCCACAN
NTGTGGCK
PBM
Zhu et al.(2009)
Met32
0.773
0.756
MET32
M07452_2.00
Saccharomyces cerevisiae
MGCCACM
KGTGGCK
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0334.1
0.773
0.756
MET32
M08518_2.00
Saccharomyces cerevisiae
VHKCCACA
TGTGGMDB
Misc
DeBoer et al.(2011)
YDR253C_1375
0.773
0.756
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Scas_Contig568.5
C2H2 ZF
118
140
YPCSKCELIFLRSSDLRRHEKAH
Scas_Contig568.5
C2H2 ZF
146
167
HICSQCGKGFARKDALKRHFNT
Links
Other
C2H2 ZF
family TFs
Other
Saccharomyces castellii
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy