Scas_Contig568.5 (Saccharomyces castellii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Scas_Contig568.5 T144948_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MET31
M00040_2.00 		Saccharomyces cerevisiae
NNHCACCTMN
NKAGGTGDNN		 PBM
Badis et al.(2008)
MET31_2146 		0.782 0.822
MET31
M07470_2.00 		Saccharomyces cerevisiae
MGCCACNNH
DNNGTGGCK		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0333.1 		0.782 0.822
MET31
M08543_2.00 		Saccharomyces cerevisiae
VCACWVYK
MRBWGTGB		 Misc
DeBoer et al.(2011)
YPL038W_1370 		0.782 0.822
MET31
M10402_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MET31_01 		0.782 0.822
MET32
M00022_2.00 		Saccharomyces cerevisiae
NVMGCCACAV
BTGTGGCKBN		 PBM
Badis et al.(2008)
MET32_2153 		0.773 0.756
MET32
M01528_2.00 		Saccharomyces cerevisiae
MGCCACAN
NTGTGGCK		 PBM
Zhu et al.(2009)
Met32 		0.773 0.756
MET32
M07452_2.00 		Saccharomyces cerevisiae
MGCCACM
KGTGGCK		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0334.1 		0.773 0.756
MET32
M08518_2.00 		Saccharomyces cerevisiae
VHKCCACA
TGTGGMDB		 Misc
DeBoer et al.(2011)
YDR253C_1375 		0.773 0.756
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig568.5 C2H2 ZF 118 140
Scas_Contig568.5 C2H2 ZF 146 167

Links

Other C2H2 ZF family TFs
Other Saccharomyces castellii TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCAS_0C02430 Naumovozyma castellii NCAS_0C02430 I 0.827
NDAI_0E03120 Naumovozyma dairenensis NDAI_0E03120 N 0.797
Kwal_11824 Kluyveromyces waltii Kwal_11824 I 0.796
LALA0_S04e04720g Lachancea lanzarotensis LALA0_S04e04720g I 0.796
KLTH0E11330g Lachancea thermotolerans KLTH0E11330g I 0.796
KLTH0E11330g Kluyveromyces thermotolerans KLTH0E11330g I 0.796
ZBAI_05898 Zygosaccharomyces bailii ZBAI_05898 I 0.793
ZBAI_00597 Zygosaccharomyces bailii ZBAI_00597 I 0.793
MET31 Saccharomyces cerevisiae YPL038W D 0.782
25018_YPL038W Saccharomyces bayanus 25018_YPL038W I 0.782
23564_YPL038W Saccharomyces paradoxus 23564_YPL038W I 0.782
SU7_3598 Saccharomyces arboricola SU7_3598 I 0.782
SKUD_139603 Saccharomyces kudriavzevii SKUD_139603 I 0.782
NDAI_0C05210 Naumovozyma dairenensis NDAI_0C05210 I 0.782
KLLA0_D11902g Kluyveromyces lactis KLLA0_D11902g I 0.781
CLUG_05144 Candida lusitaniae CLUG_05144 N 0.781
CLUG_05144 Clavispora lusitaniae CLUG_05144 N 0.781
3987_YDR253C Saccharomyces mikatae 3987_YDR253C I 0.773
SKUD_191509 Saccharomyces kudriavzevii SKUD_191509 I 0.773
KAFR_0E02900 Kazachstania africana KAFR_0E02900 I 0.773
22143_YPL038W Saccharomyces mikatae 22143_YPL038W I 0.773
MET32 Saccharomyces cerevisiae YDR253C D 0.773
4678_YDR253C Saccharomyces paradoxus 4678_YDR253C I 0.773
SAKL0H11440g Lachancea kluyveri SAKL0H11440g I 0.772
CD36_24290 Candida dubliniensis CD36_24290 N 0.771
CaO19.9326 Candida albicans CaO19.9326 N 0.771
CTRG_02010 Candida tropicalis CTRG_02010 N 0.771
LELG_02390 Lodderomyces elongisporus LELG_02390 N 0.771
CaO19.1757 Candida albicans CaO19.1757 N 0.771
G210_5850 Candida maltosa G210_5850 N 0.771
Scas_Contig721.56 Saccharomyces castellii Scas_Contig721.56 I 0.769
NCAS_0B02480 Naumovozyma castellii NCAS_0B02480 I 0.769
ZYRO0F08162g Zygosaccharomyces rouxii ZYRO0F08162g I 0.769
TPHA_0L01320 Tetrapisispora phaffii TPHA_0L01320 I 0.767
BN7_573 Wickerhamomyces ciferrii BN7_573 I 0.766
CAGL0L12562g Candida glabrata CAGL0L12562g N 0.763
TBLA_0A00350 Tetrapisispora blattae TBLA_0A00350 I 0.761
XP_002489513.1 Pichia pastoris XP_002489513.1 I 0.758
PAS_chr1-3_0170 Komagataella pastoris PAS_chr1-3_0170 I 0.758
KNAG_0A04030 Kazachstania naganishii KNAG_0A04030 I 0.758
Kpol_1031p73 Vanderwaltozyma polyspora Kpol_1031p73 N 0.757