Scas_Contig721.56 (Saccharomyces castellii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Scas_Contig721.56 T144983_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MET32
M00022_2.00 		Saccharomyces cerevisiae
NVMGCCACAV
BTGTGGCKBN		 PBM
Badis et al.(2008)
MET32_2153 		0.773 0.850
MET32
M01528_2.00 		Saccharomyces cerevisiae
MGCCACAN
NTGTGGCK		 PBM
Zhu et al.(2009)
Met32 		0.773 0.850
MET32
M07452_2.00 		Saccharomyces cerevisiae
MGCCACM
KGTGGCK		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0334.1 		0.773 0.850
MET32
M08518_2.00 		Saccharomyces cerevisiae
VHKCCACA
TGTGGMDB		 Misc
DeBoer et al.(2011)
YDR253C_1375 		0.773 0.850
MET31
M00040_2.00 		Saccharomyces cerevisiae
NNHCACCTMN
NKAGGTGDNN		 PBM
Badis et al.(2008)
MET31_2146 		0.763 0.800
MET31
M07470_2.00 		Saccharomyces cerevisiae
MGCCACNNH
DNNGTGGCK		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0333.1 		0.763 0.800
MET31
M08543_2.00 		Saccharomyces cerevisiae
VCACWVYK
MRBWGTGB		 Misc
DeBoer et al.(2011)
YPL038W_1370 		0.763 0.800
MET31
M10402_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MET31_01 		0.763 0.800
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig721.56 C2H2 ZF 115 137
Scas_Contig721.56 C2H2 ZF 144 160

Links

Other C2H2 ZF family TFs
Other Saccharomyces castellii TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCAS_0B02480 Naumovozyma castellii NCAS_0B02480 I 0.827
SAKL0H11440g Lachancea kluyveri SAKL0H11440g I 0.777
3987_YDR253C Saccharomyces mikatae 3987_YDR253C I 0.773
SKUD_191509 Saccharomyces kudriavzevii SKUD_191509 I 0.773
4678_YDR253C Saccharomyces paradoxus 4678_YDR253C I 0.773
MET32 Saccharomyces cerevisiae YDR253C D 0.773
NDAI_0C05210 Naumovozyma dairenensis NDAI_0C05210 I 0.773
ZYRO0F08162g Zygosaccharomyces rouxii ZYRO0F08162g I 0.769
Scas_Contig568.5 Saccharomyces castellii Scas_Contig568.5 I 0.769
ZBAI_00597 Zygosaccharomyces bailii ZBAI_00597 I 0.769
NCAS_0C02430 Naumovozyma castellii NCAS_0C02430 I 0.769
ZBAI_05898 Zygosaccharomyces bailii ZBAI_05898 I 0.769
25018_YPL038W Saccharomyces bayanus 25018_YPL038W I 0.763
SU7_3598 Saccharomyces arboricola SU7_3598 I 0.763
MET31 Saccharomyces cerevisiae YPL038W D 0.763
23564_YPL038W Saccharomyces paradoxus 23564_YPL038W I 0.763
SKUD_139603 Saccharomyces kudriavzevii SKUD_139603 I 0.763
TPHA_0L01320 Tetrapisispora phaffii TPHA_0L01320 I 0.763
CAGL0L12562g Candida glabrata CAGL0L12562g N 0.758
TBLA_0A00350 Tetrapisispora blattae TBLA_0A00350 I 0.757
AWRI1499_2615 Brettanomyces bruxellensis AWRI1499_2615 N 0.756