Scas_Contig703.23 (Saccharomyces castellii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Scas_Contig703.23 T144968_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TDA9
M00035_2.00 		Saccharomyces cerevisiae
NNCCCCGCAH
DTGCGGGGNN		 PBM
Badis et al.(2008)
YML081W_2152 		0.806 0.935
TDA9
M01537_2.00 		Saccharomyces cerevisiae
NNCCCCDCHN
NDGHGGGGNN		 PBM
Zhu et al.(2009)
Yml081w 		0.806 0.935
TDA9
M07465_2.00 		Saccharomyces cerevisiae
NCCCCDCHN
NDGHGGGGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0431.1 		0.806 0.935
TDA9
M08537_2.00 		Saccharomyces cerevisiae
NHDNRHTACCCCGCWNHNNNB
VNNNDNWGCGGGGTADYNHDN		 Misc
DeBoer et al.(2011)
YML081W_848 		0.806 0.935
RSF2
M00031_2.00 		Saccharomyces cerevisiae
NDCCCCKCWN
NWGMGGGGHN		 PBM
Badis et al.(2008)
ZMS1_4493 		0.802 0.913
RSF2
M07461_2.00 		Saccharomyces cerevisiae
NWCCCCDCW
WGHGGGGWN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0441.1 		0.802 0.913
RSF2
M08532_2.00 		Saccharomyces cerevisiae
NWCCCCDCW
WGHGGGGWN		 Misc
DeBoer et al.(2011)
YJR127C_575 		0.802 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig703.23 C2H2 ZF 72 94
Scas_Contig703.23 C2H2 ZF 100 123

Links

Other C2H2 ZF family TFs
Other Saccharomyces castellii TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCAS_0A06250 Naumovozyma castellii NCAS_0A06250 I 0.827
TDEL_0D00670 Torulaspora delbrueckii TDEL_0D00670 I 0.821
ZBAI_03168 Zygosaccharomyces bailii ZBAI_03168 I 0.821
ZBAI_03167 Zygosaccharomyces bailii ZBAI_03167 I 0.821
ZBAI_08875 Zygosaccharomyces bailii ZBAI_08875 I 0.821
ZYRO0B14894g Zygosaccharomyces rouxii ZYRO0B14894g I 0.816
SKUD_162303 Saccharomyces kudriavzevii SKUD_162303 I 0.806
SU7_2441 Saccharomyces arboricola SU7_2441 I 0.806
AACERI_AaceriAER159C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER159C I 0.806
TDA9 Saccharomyces cerevisiae YML081W D 0.806
16099_Multiple Saccharomyces mikatae 16099_Multiple I 0.806
SAKL0G18062g Lachancea kluyveri SAKL0G18062g I 0.806
AGOS_AER159C Ashbya gossypii AGOS_AER159C I 0.806
17638_YML081W Saccharomyces paradoxus 17638_YML081W I 0.806
18114_YML081W Saccharomyces bayanus 18114_YML081W I 0.806
13784_YJR127C Saccharomyces bayanus 13784_YJR127C I 0.802
12664_YJR127C Saccharomyces mikatae 12664_YJR127C I 0.802
12764_Multiple Saccharomyces paradoxus 12764_Multiple I 0.802
RSF2 Saccharomyces cerevisiae YJR127C D 0.802
KAFR_0B06810 Kazachstania africana KAFR_0B06810 I 0.801
NDAI_0D03240 Naumovozyma dairenensis NDAI_0D03240 I 0.798
KLTH0D18062g Lachancea thermotolerans KLTH0D18062g I 0.791
LALA0_S08e05644g Lachancea lanzarotensis LALA0_S08e05644g I 0.791
Kwal_16621 Kluyveromyces waltii Kwal_16621 I 0.791
KLTH0D18062g Kluyveromyces thermotolerans KLTH0D18062g I 0.791
TBLA_0E04770 Tetrapisispora blattae TBLA_0E04770 I 0.787
KLLA0_B04477g Kluyveromyces lactis KLLA0_B04477g I 0.786
KAFR_0E04270 Kazachstania africana KAFR_0E04270 I 0.782
NDAI_0J02850 Naumovozyma dairenensis NDAI_0J02850 I 0.782
TBLA_0B06160 Tetrapisispora blattae TBLA_0B06160 I 0.779
CAGL0H04213g Candida glabrata CAGL0H04213g I 0.772
KNAG_0M00350 Kazachstania naganishii KNAG_0M00350 I 0.768
TPHA_0B00380 Tetrapisispora phaffii TPHA_0B00380 I 0.761
CAGL0M00594g Candida glabrata CAGL0M00594g I 0.760