LjT40J14.40.nc (Lotus japonicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 LjT40J14.40.nc T146388_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjT40J14.40.nc C2H2 ZF 79 103
LjT40J14.40.nc C2H2 ZF 108 132
LjT40J14.40.nc C2H2 ZF 138 162
LjT40J14.40.nc C2H2 ZF 168 193
LjT40J14.40.nc C2H2 ZF 232 257

Links

Other C2H2 ZF family TFs
Other Lotus japonicus TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_00041 Cicer arietinum Ca_00041 N 0.818
Eucgr.G00356 Eucalyptus grandis Eucgr.G00356 N 0.811
GLYMA08G13310 Glycine max GLYMA08G13310 N 0.810
GLYMA05G30150 Glycine max GLYMA05G30150 N 0.810
Cucsa.076000 Cucumis sativus Cucsa.076000 N 0.804
Gorai.002G214700 Gossypium raimondii Gorai.002G214700 N 0.804
SapurV1A.0136s0510 Salix purpurea SapurV1A.0136s0510 N 0.802
POPTR_0022s00900 Populus trichocarpa POPTR_0022s00900 N 0.802
evm.TU.supercontig_161.1 Carica papaya evm.TU.supercontig_161.1 N 0.802
30093.m000368 Ricinus communis 30093.m000368 N 0.800
VIT_12s0035g00660 Vitis vinifera VIT_12s0035g00660 N 0.800
PK13777.1 Cannabis sativa PK13777.1 N 0.799
Pm003925 Prunus mume Pm003925 N 0.798
PRUPE_ppa007287mg Prunus persica PRUPE_ppa007287mg N 0.798
TCM_006252 Theobroma cacao TCM_006252 N 0.794
SapurV1A.0618s0010 Salix purpurea SapurV1A.0618s0010 N 0.792
cassava13878.valid.m1 Manihot esculenta cassava13878.valid.m1 N 0.792
SapurV1A.0470s0060 Salix purpurea SapurV1A.0470s0060 N 0.792
POPTR_0004s23050 Populus trichocarpa POPTR_0004s23050 N 0.788
mgf016294m Mimulus guttatus mgf016294m N 0.787