CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_040270
(
Penicillium marneffei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PMAA_040270
T146591_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_04116
M01448_2.00
Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY
PBM
Najafabadi et al.(2015a)
pTH11149
0.813
0.957
NCU03975
M01879_2.00
Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN
PBM
Weirauch et al.(2014)
pTH9677
0.788
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_040270.t1
C2H2 ZF
118
140
FHCSTCQKGFARRSDLARHERIH
PMAA_040270.t1
C2H2 ZF
146
170
HACDWPGCGKQFIQRSALTVHARVH
PMAA_040270.t1
C2H2 ZF
176
198
HMCERCGKPFSDSSSLARHRRIH
PMAA_040270.t1
C2H2 ZF
204
228
YKCPYANCQKTFTRRTTLTRHQNHH
Links
Other
C2H2 ZF
family TFs
Other
Penicillium marneffei
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy