CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ASU_05270
(
Ascaris suum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ASU_05270
T152303_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mnm-2
M00616_2.00
Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY
PBM
Narasimhan et al.(2015)
pTH9080
0.790
0.884
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ASU_05270
C2H2 ZF
180
202
YRCDICEKTFSRSNTLITHKRIH
ASU_05270
C2H2 ZF
208
230
FQCDHCGRAFRQPGNLTRHRFTH
ASU_05270
C2H2 ZF
236
258
YVCSYCEKAFNRASNLHTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Ascaris suum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DME_0000476501
Dracunculus medinensis
DME_0000476501
I
0.800
ANCCEY_06081
Ancylostoma ceylanicum
ANCCEY_06081
I
0.797
DICVIV_12463
Dictyocaulus viviparus
DICVIV_12463
I
0.793
HPBE_0001596301
Heligmosomoides bakeri
HPBE_0001596301
I
0.793
RSKR_0000680500
Rhabditophanes kr3021
RSKR_0000680500
I
0.793
ACAC_0001268601
Angiostrongylus cantonensis
ACAC_0001268601
I
0.793
ACOC_0000685901
Angiostrongylus costaricensis
ACOC_0000685901
I
0.793
CBN21670
Caenorhabditis brenneri
CBN21670
I
0.790
CBG16689
Caenorhabditis briggsae
CBG16689
I
0.790
CRE00068
Caenorhabditis remanei
CRE00068
I
0.790
CJA18173
Caenorhabditis japonica
CJA18173
I
0.790
mnm-2
Caenorhabditis elegans
WBGene00003380
D
0.790
HCOI00972500
Haemonchus contortus
HCOI00972500
I
0.787
NBR_0000581401
Nippostrongylus brasiliensis
NBR_0000581401
I
0.780
EVEC_0000906601
Enterobius vermicularis
EVEC_0000906601
I
0.777
WBGene00238816
Onchocerca volvulus
WBGene00238816
I
0.771
nDi.2.2.2.g05062
Dirofilaria immitis
nDi.2.2.2.g05062
I
0.771
Bm2124
Brugia malayi
Bm2124
I
0.771
LOAG_05928
Loa loa
LOAG_05928
I
0.768