D917_04179 (Trichinella nativa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 D917_04179 T152864_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF1
M00226_2.00 		Homo sapiens
CMCGCCCM
KGGGCGKG		 PBM
Barrera et al.(2016)
KLF1_REF 		0.757 0.768
KLF1
M08293_2.00 		Homo sapiens
NVNNNRCCMCRCCCH
DGGGYGKGGYNNNBN		 ChIP-seq
Schmitges et al.(2016)
Q13351.MEME 		0.757 0.768
KLF1
M08871_2.00 		Homo sapiens
SVNDGCCMCRCCCH
DGGGYGKGGCHNBS		 Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A 		0.757 0.768
KLF1
M10163_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EKLF_Q5_01 		0.757 0.768
KLF1
M10164_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EKLF_Q5 		0.757 0.768
Klf1
M08099_2.00 		Mus musculus
NRCCACACCCW
WGGGTGTGGYN		 ChIP-seq
Mathelier et al.(2014)
MA0493.1 		0.757 0.754
Klf1
M09008_2.00 		Mus musculus
MVMNSCCMCRCCCH
DGGGYGKGGSNKBK		 Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A 		0.757 0.754
Klf1
M09516_2.00 		Mus musculus
DRCCACACCCWN
NWGGGTGTGGYH		 Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478 		0.757 0.754
KLF1
M00224_2.00 		Homo sapiens
YMCGCCCH
DGGGCGKR		 PBM
Barrera et al.(2016)
KLF1_H299Y 		0.757 0.754
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D917_04179 C2H2 ZF 298 322
D917_04179 C2H2 ZF 328 352
D917_04179 C2H2 ZF 358 380

Links

Other C2H2 ZF family TFs
Other Trichinella nativa TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
D917_09327 Trichinella nativa D917_09327 I 0.827
EFV52159 Trichinella spiralis EFV52159 I 0.827
D918_01816 Trichuris suis D918_01816 I 0.780
TTRE_0000268201 Trichuris trichiura TTRE_0000268201 I 0.780
csin105473 Clonorchis sinensis csin105473 I 0.770
T265_06412 Opisthorchis viverrini T265_06412 I 0.770
CLEC010043 Cimex lectularius CLEC010043 I 0.766
ECPE_0000408701 Echinostoma caproni ECPE_0000408701 I 0.764
ENSBTAP00000043340-D1 Bos grunniens ENSBTAP00000043340-D1 I 0.761
ENSMPUG00000004544 Mustela putorius furo ENSMPUG00000004544 I 0.761
Ppa-klf-1 Pristionchus pacificus PPA04120 I 0.761
CGI_10024574 Crassostrea gigas CGI_10024574 I 0.761
ENSSHAG00000015288 Sarcophilus harrisii ENSSHAG00000015288 I 0.761
KLF1 Sus scrofa ENSSSCG00000013730 I 0.761
KLF1 Otolemur garnettii ENSOGAG00000025438 I 0.761
KLF1 Monodelphis domestica ENSMODG00000011491 I 0.761
KLF1 Bos taurus ENSBTAG00000006083 I 0.761
KLF1 Felis catus ENSFCAG00000026066 I 0.761
KLF1 Canis familiaris ENSCAFG00000017111 I 0.761
ENSAMEG00000012407 Ailuropoda melanoleuca ENSAMEG00000012407 I 0.761
HHAL010738-PA Halyomorpha halys HHAL010738-PA I 0.761
KLF1 Myotis lucifugus ENSMLUG00000012751 I 0.761
tetur11g05790 Tetranychus urticae tetur11g05790 I 0.759
fgenesh2_pg.scaffold_114000041 Branchiostoma floridae fgenesh2_pg.scaffold_114000041 I 0.758
ENSSTOG00000021956 Ictidomys tridecemlineatus ENSSTOG00000021956 I 0.757
KLF1 Tupaia belangeri ENSTBEG00000013433 I 0.757
ENSSHAG00000002694 Sarcophilus harrisii ENSSHAG00000002694 I 0.757
ENSMMUP00000014716 Macaca fascicularis ENSMMUP00000014716 I 0.757
ENSONIG00000008968 Oreochromis niloticus ENSONIG00000008968 I 0.757
KLF1 Gorilla gorilla ENSGGOG00000003408 I 0.757
KLF1 Loxodonta africana ENSLAFG00000016145 I 0.757
KLF1 Microcebus murinus ENSMICG00000016260 I 0.757
KLF1 Homo sapiens ENSG00000105610 D 0.757
klf3 Danio rerio ENSDARG00000015495 I 0.757
KLF1 Callithrix jacchus ENSCJAG00000004762 I 0.757
KLF1 Cavia porcellus ENSCPOG00000000784 I 0.757
ENSCSAG00000006545 Chlorocebus sabaeus ENSCSAG00000006545 I 0.757
KLF1 Macaca mulatta ENSMMUG00000011230 I 0.757
KLF8 Monodelphis domestica ENSMODG00000010883 I 0.757
KLF1 Procavia capensis ENSPCAG00000015589 I 0.757
ENSPPYG00000009612 Pongo abelii ENSPPYG00000009612 I 0.757
KLF1 Pan troglodytes ENSPTRG00000010547 I 0.757
KLF1 Ochotona princeps ENSOPRG00000004951 I 0.757
KLF1 Oryctolagus cuniculus ENSOCUG00000011998 I 0.757
Klf1 Mus musculus ENSMUSG00000054191 D 0.757
ENSNLEG00000012868 Nomascus leucogenys ENSNLEG00000012868 I 0.757
Klf1 Rattus norvegicus ENSRNOG00000003443 I 0.757