CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
D917_09327
(
Trichinella nativa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
D917_09327
T152907_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KLF1
M00226_2.00
Homo sapiens
CMCGCCCM
KGGGCGKG
PBM
Barrera et al.(2016)
KLF1_REF
0.757
0.768
KLF1
M08293_2.00
Homo sapiens
NVNNNRCCMCRCCCH
DGGGYGKGGYNNNBN
ChIP-seq
Schmitges et al.(2016)
Q13351.MEME
0.757
0.768
KLF1
M08871_2.00
Homo sapiens
SVNDGCCMCRCCCH
DGGGYGKGGCHNBS
Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A
0.757
0.768
KLF1
M10163_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5_01
0.757
0.768
KLF1
M10164_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5
0.757
0.768
Klf1
M08099_2.00
Mus musculus
NRCCACACCCW
WGGGTGTGGYN
ChIP-seq
Mathelier et al.(2014)
MA0493.1
0.757
0.754
Klf1
M09008_2.00
Mus musculus
MVMNSCCMCRCCCH
DGGGYGKGGSNKBK
Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A
0.757
0.754
Klf1
M09516_2.00
Mus musculus
DRCCACACCCWN
NWGGGTGTGGYH
Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478
0.757
0.754
KLF1
M00224_2.00
Homo sapiens
YMCGCCCH
DGGGCGKR
PBM
Barrera et al.(2016)
KLF1_H299Y
0.757
0.754
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_09327
C2H2 ZF
19
50
RCKKNIAHGCTHPGCVKTYTKSSHLKAHMRIH
D917_09327
C2H2 ZF
56
80
YACNWPDCGWKFARSDELTRHVRKH
D917_09327
C2H2 ZF
86
108
FHCAICGRAFARSDHLTLHMKRH
Links
Other
C2H2 ZF
family TFs
Other
Trichinella nativa
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
D917_04179
Trichinella nativa
D917_04179
I
0.827
EFV52159
Trichinella spiralis
EFV52159
I
0.827
D918_01816
Trichuris suis
D918_01816
I
0.780
TTRE_0000268201
Trichuris trichiura
TTRE_0000268201
I
0.780
csin105473
Clonorchis sinensis
csin105473
I
0.770
T265_06412
Opisthorchis viverrini
T265_06412
I
0.770
CLEC010043
Cimex lectularius
CLEC010043
I
0.766
ECPE_0000408701
Echinostoma caproni
ECPE_0000408701
I
0.764
ENSBTAP00000043340-D1
Bos grunniens
ENSBTAP00000043340-D1
I
0.761
ENSMPUG00000004544
Mustela putorius furo
ENSMPUG00000004544
I
0.761
Ppa-klf-1
Pristionchus pacificus
PPA04120
I
0.761
CGI_10024574
Crassostrea gigas
CGI_10024574
I
0.761
ENSSHAG00000015288
Sarcophilus harrisii
ENSSHAG00000015288
I
0.761
KLF1
Sus scrofa
ENSSSCG00000013730
I
0.761
KLF1
Otolemur garnettii
ENSOGAG00000025438
I
0.761
KLF1
Monodelphis domestica
ENSMODG00000011491
I
0.761
KLF1
Bos taurus
ENSBTAG00000006083
I
0.761
KLF1
Felis catus
ENSFCAG00000026066
I
0.761
KLF1
Canis familiaris
ENSCAFG00000017111
I
0.761
ENSAMEG00000012407
Ailuropoda melanoleuca
ENSAMEG00000012407
I
0.761
HHAL010738-PA
Halyomorpha halys
HHAL010738-PA
I
0.761
KLF1
Myotis lucifugus
ENSMLUG00000012751
I
0.761
tetur11g05790
Tetranychus urticae
tetur11g05790
I
0.759
fgenesh2_pg.scaffold_114000041
Branchiostoma floridae
fgenesh2_pg.scaffold_114000041
I
0.758
ENSSTOG00000021956
Ictidomys tridecemlineatus
ENSSTOG00000021956
I
0.757
KLF1
Tupaia belangeri
ENSTBEG00000013433
I
0.757
ENSSHAG00000002694
Sarcophilus harrisii
ENSSHAG00000002694
I
0.757
ENSMMUP00000014716
Macaca fascicularis
ENSMMUP00000014716
I
0.757
ENSONIG00000008968
Oreochromis niloticus
ENSONIG00000008968
I
0.757
KLF1
Gorilla gorilla
ENSGGOG00000003408
I
0.757
KLF1
Loxodonta africana
ENSLAFG00000016145
I
0.757
KLF1
Microcebus murinus
ENSMICG00000016260
I
0.757
KLF1
Homo sapiens
ENSG00000105610
D
0.757
klf3
Danio rerio
ENSDARG00000015495
I
0.757
KLF1
Callithrix jacchus
ENSCJAG00000004762
I
0.757
KLF1
Cavia porcellus
ENSCPOG00000000784
I
0.757
ENSCSAG00000006545
Chlorocebus sabaeus
ENSCSAG00000006545
I
0.757
KLF1
Macaca mulatta
ENSMMUG00000011230
I
0.757
KLF8
Monodelphis domestica
ENSMODG00000010883
I
0.757
KLF1
Procavia capensis
ENSPCAG00000015589
I
0.757
ENSPPYG00000009612
Pongo abelii
ENSPPYG00000009612
I
0.757
KLF1
Pan troglodytes
ENSPTRG00000010547
I
0.757
KLF1
Ochotona princeps
ENSOPRG00000004951
I
0.757
KLF1
Oryctolagus cuniculus
ENSOCUG00000011998
I
0.757
Klf1
Mus musculus
ENSMUSG00000054191
D
0.757
ENSNLEG00000012868
Nomascus leucogenys
ENSNLEG00000012868
I
0.757
Klf1
Rattus norvegicus
ENSRNOG00000003443
I
0.757