CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_000003100
(
Globodera pallida
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
GPLIN_000003100
T153544_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000003100
C2H2 ZF
213
235
HKCDVCGKAFPYFSILESHKRCH
GPLIN_000003100
C2H2 ZF
241
263
FLCHFCDKRFAQKATLQVHERTH
GPLIN_000003100
C2H2 ZF
269
292
YKCKFCEKTFAQYGTKTVHEKSAH
GPLIN_000003100
C2H2 ZF
298
320
YKCPHCDKDLSSPSALYTHKKTH
GPLIN_000003100
C2H2 ZF
325
348
FQCQHCPKTFTLKNYLKLHVKQVH
GPLIN_000003100
C2H2 ZF
355
377
HCCRFCGKSFAYAGSLQVHLRTH
GPLIN_000003100
C2H2 ZF
383
405
YQCKFCPKAFASQGNLQSHERTH
GPLIN_000003100
C2H2 ZF
411
433
YACGKCGRAFIQKSQLTAHESTH
GPLIN_000003100
C2H2 ZF
585
607
FVCKFCGKRYAYASSLYVHTRLH
GPLIN_000003100
C2H2 ZF
613
635
FRCNFCDKSFTNQGNMQVHLRVH
GPLIN_000003100
C2H2 ZF
641
662
YKCNGCGKGYAQKVGLNIHQEQ
Links
Other
C2H2 ZF
family TFs
Other
Globodera pallida
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy