GPLIN_000003100 (Globodera pallida)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 GPLIN_000003100 T153544_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000003100 C2H2 ZF 213 235
GPLIN_000003100 C2H2 ZF 241 263
GPLIN_000003100 C2H2 ZF 269 292
GPLIN_000003100 C2H2 ZF 298 320
GPLIN_000003100 C2H2 ZF 325 348
GPLIN_000003100 C2H2 ZF 355 377
GPLIN_000003100 C2H2 ZF 383 405
GPLIN_000003100 C2H2 ZF 411 433
GPLIN_000003100 C2H2 ZF 585 607
GPLIN_000003100 C2H2 ZF 613 635
GPLIN_000003100 C2H2 ZF 641 662

Links

Other C2H2 ZF family TFs
Other Globodera pallida TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EEL_0000837001 Elaeophora elaphi EEL_0000837001 N 0.780
nDi.2.2.2.g05206 Dirofilaria immitis nDi.2.2.2.g05206 N 0.780
WUBG_03748 Wuchereria bancrofti WUBG_03748 N 0.780
ASU_02874 Ascaris suum ASU_02874 N 0.780
nOo.2.0.1.g02893 Onchocerca ochengi nOo.2.0.1.g02893 N 0.780
WBGene00242154 Onchocerca volvulus WBGene00242154 N 0.780
Bm10919 Brugia malayi Bm10919 N 0.779
RSKR_0000771600 Rhabditophanes kr3021 RSKR_0000771600 N 0.779
L892_g27548 Steinernema scapterisci L892_g27548 N 0.776
L893_g2100 Steinernema glaseri L893_g2100 N 0.776
L596_g25323 Steinernema carpocapsae L596_g25323 N 0.776
L898_g11982 Steinernema monticolum L898_g11982 N 0.776
L889_g23172 Steinernema feltiae L889_g23172 N 0.775
LOAG_03372 Loa loa LOAG_03372 N 0.775
PTRK_0000168600 Parastrongyloides trichosuri PTRK_0000168600 N 0.773
HCOI00939900 Haemonchus contortus HCOI00939900 N 0.773
SVE_1922800 Strongyloides venezuelensis SVE_1922800 N 0.771
SPAL_0001279900 Strongyloides papillosus SPAL_0001279900 N 0.771
DICVIV_07953 Dictyocaulus viviparus DICVIV_07953 N 0.768
SSTP_0001241100 Strongyloides stercoralis SSTP_0001241100 N 0.768