GPLIN_000910900 (Globodera pallida)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 GPLIN_000910900 T153590_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000910900 C2H2 ZF 10 32
GPLIN_000910900 C2H2 ZF 39 63

Links

Other C2H2 ZF family TFs
Other Globodera pallida TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MhA1_Contig2408.frz3.gene5 Meloidogyne hapla MhA1_Contig2408.frz3.gene5 N 0.782
snap_masked-nMf.1.1.scaf00901-processed-gene-0.5 Meloidogyne floridensis snap_masked-nMf.1.1.scaf00901-processed-gene-0.5 N 0.782
ENSXMAG00000013401 Xiphophorus maculatus ENSXMAG00000013401 N 0.776
scaffold799-EXSNAP2012.6 Pristionchus exspectatus scaffold799-EXSNAP2012.6 N 0.767
Ocbimv22019249m.g Octopus bimaculoides Ocbimv22019249m.g N 0.766
LDEC018872 Leptinotarsa decemlineata LDEC018872 N 0.766
CLEC011939 Cimex lectularius CLEC011939 N 0.766
LCUP010714 Lucilia cuprina LCUP010714 N 0.766
AALB009198 Anopheles albimanus AALB009198 N 0.766
AEPI009631 Anopheles epiroticus AEPI009631 N 0.766
ASTEI05791 Anopheles stephensi ASTEI05791 N 0.766
PPAI004317 Phlebotomus papatasi PPAI004317 N 0.766
AMAM021135 Anopheles maculatus AMAM021135 N 0.766
Myotis_brandtii_Zic5_10007324 Myotis brandtii Myotis_brandtii_Zic5_10007324 N 0.766
ADIR009951 Anopheles dirus ADIR009951 N 0.766
AARA001756 Anopheles arabiensis AARA001756 N 0.766
YQE_06158 Dendroctonus ponderosae YQE_06158 N 0.766
ENSMPUG00000011382 Mustela putorius furo ENSMPUG00000011382 N 0.766
ENSMLUG00000027631 Myotis lucifugus ENSMLUG00000027631 N 0.766
ZIC5 Loxodonta africana ENSLAFG00000009640 N 0.766
ENSLACG00000015786 Latimeria chalumnae ENSLACG00000015786 N 0.766
ZIC5 Otolemur garnettii ENSOGAG00000024269 N 0.766
ENSSHAG00000004201 Sarcophilus harrisii ENSSHAG00000004201 N 0.766
Alligator_sinensis_CCG018454.1 Alligator sinensis Alligator_sinensis_CCG018454.1 N 0.766
D917_03218 Trichinella nativa D917_03218 N 0.766
MESCA007328 Megaselia scalaris MESCA007328 N 0.766
ENSSTOG00000027399 Ictidomys tridecemlineatus ENSSTOG00000027399 I 0.766
ENSCPOG00000025550 Cavia porcellus ENSCPOG00000025550 N 0.766
Gfo_R008500 Geospiza fortis Gfo_R008500 N 0.760
ZIC1 Homo sapiens ENSG00000152977 D 0.760
ENSMEUG00000007408 Macropus eugenii ENSMEUG00000007408 N 0.760
ZIC3 Macaca mulatta ENSMMUG00000002023 N 0.760