L596_g21750 (Steinernema carpocapsae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 L596_g21750 T154359_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
blmp-1
M08103_2.00
Caenorhabditis elegans
YTYTCHYTTTY

RAAARDGARAR
ChIP-seq
Mathelier et al.(2014)
MA0537.1
0.770 0.825
blmp-1
M08195_2.00
Caenorhabditis elegans
VACTTTCDCY

RGHGAAAGTB
ChIP-seq
Contrino et al.(2012)
Mw137
0.770 0.825
Blimp-1
M03692_2.00
Drosophila melanogaster
NNYACTTTCVYYN

NRRBGAAAGTRNN
SELEX
Nitta et al.(2015)
Blimp-1_1
0.759 0.816
Blimp-1
M06141_2.00
Drosophila melanogaster
ACTTTCACTTTY

RAAAGTGAAAGT
B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625
0.759 0.816
Blimp-1
M06142_2.00
Drosophila melanogaster
RCTTTCMCTTTY

RAAAGKGAAAGY
B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625
0.759 0.816
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g21750.t1 C2H2 ZF 709 731
L596_g21750.t1 C2H2 ZF 737 759
L596_g21750.t1 C2H2 ZF 765 787
L596_g21750.t1 C2H2 ZF 793 815
L596_g21750.t1 C2H2 ZF 821 842

Links

Other C2H2 ZF family TFs
Other Steinernema carpocapsae TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL001304 Aedes aegypti AAEL001304 I 0.000
AALB000437 Anopheles albimanus AALB000437 I 0.000
AARA000223 Anopheles arabiensis AARA000223 I 0.000
ACEP18350 Atta cephalotes ACEP18350 I 0.000
ACOM032922 Anopheles coluzzii ACOM032922 I 0.000
ACUA021013 Anopheles culicifacies ACUA021013 I 0.000
ACYPI006350 Acyrthosiphon pisum ACYPI006350 I 0.000
ADAC010223 Anopheles darlingi ADAC010223 I 0.000
ADIR006100 Anopheles dirus ADIR006100 I 0.000
AFAF014224 Anopheles farauti AFAF014224 I 0.000
AFUN005214 Anopheles funestus AFUN005214 I 0.000
AGAP009400 Anopheles gambiae AGAP009400 I 0.000
AMAM013893 Anopheles maculatus AMAM013893 I 0.000
AMEC007553 Anopheles melas AMEC007553 I 0.000
AMEM005377 Anopheles merus AMEM005377 I 0.000
AMIN001798 Anopheles minimus AMIN001798 I 0.000
AQUA007907 Anopheles quadriannulatus AQUA007907 I 0.000
ASTEI07347 Anopheles stephensi ASTEI07347 I 0.000
BGIBMGA007914 Bombyx mori BGIBMGA007914 I 0.000
Cflo_07896--XP_396918.3_APIME Camponotus floridanus Cflo_07896--XP_396918.3_APIME I 0.000
CLEC003396 Cimex lectularius CLEC003396 I 0.000
CPIJ004151 Culex quinquefasciatus CPIJ004151 I 0.000
CpipJ_CPIJ004151 Culex pipiens CpipJ_CPIJ004151 I 0.000
DAPPUDRAFT_57218 Daphnia pulex DAPPUDRAFT_57218 I 0.000
GA21254 Drosophila pseudoobscura FBgn0081242 I 0.000
GB45414 Apis mellifera GB45414 I 0.000
GD24312 Drosophila simulans FBgn0195659 I 0.000
GE12908 Drosophila yakuba FBgn0230623 I 0.000
GF14318 Drosophila ananassae FBgn0091345 I 0.000
GG21291 Drosophila erecta FBgn0113470 I 0.000
GH10687 Drosophila grimshawi FBgn0118168 I 0.000
GI11193 Drosophila mojavensis FBgn0133954 I 0.000
GJ18326 Drosophila virilis FBgn0205485 I 0.000
GK18731 Drosophila willistoni FBgn0220729 I 0.000
GL26651 Drosophila persimilis FBgn0164232 I 0.000
GM23404 Drosophila sechellia FBgn0178271 I 0.000
HMEL010318 Heliconius melpomene HMEL010318 I 0.000
Hr39 Drosophila melanogaster FBgn0261239 D 0.000
Hsal_06206--XP_396918.3_APIME Harpegnathos saltator Hsal_06206--XP_396918.3_APIME I 0.000
KGM_16581 Danaus plexippus KGM_16581 I 0.000
L798_09573 Zootermopsis nevadensis L798_09573 I 0.000
LCUP003627 Lucilia cuprina LCUP003627 I 0.000
LDEC010317 Leptinotarsa decemlineata LDEC010317 I 0.000
LLOJ003991 Lutzomyia longipalpis LLOJ003991 I 0.000
MDOA005562 Musca domestica MDOA005562 I 0.000
MESCA000912 Megaselia scalaris MESCA000912 I 0.000
NV13389 Nasonia vitripennis NV13389 I 0.000
PHUM318510 Pediculus humanus PHUM318510 I 0.000
PPAI007467 Phlebotomus papatasi PPAI007467 I 0.000
RPRC002968 Rhodnius prolixus RPRC002968 I 0.000
SINV18006 Solenopsis invicta SINV18006 I 0.000
TC014986 Tribolium castaneum TC014986 I 0.000