RSKR_0000666600 (Rhabditophanes kr3021)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RSKR_0000666600 T155900_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF6
M04400_2.00 		Homo sapiens
NVMCACRCCCH
DGGGYGTGKBN		 SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX 		0.774 0.773
KLF6
M08857_2.00 		Homo sapiens
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV		 Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A 		0.774 0.773
Klf6
M08962_2.00 		Mus musculus
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV		 Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B 		0.774 0.773
KLF6
M10113_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CPBP_Q6 		0.774 0.773
KLF6
M04401_2.00 		Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN		 SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX 		0.774 0.773
Klf7
M00134_2.00 		Mus musculus
NHHMCRCCCH
DGGGYGKDDN		 PBM
Badis et al.(2009)
Klf7_0974 		0.762 0.788
KLF7
M08298_2.00 		Homo sapiens
VVCHMCGCCCH
DGGGCGKDGBB		 ChIP-seq
Schmitges et al.(2016)
O75840.MEME 		0.762 0.788
dar1
M06171_2.00 		Drosophila melanogaster
RMCACACCCWH
DWGGGTGTGKY		 B1H
Zhu et al.(2011)
CG12029_SANGER_10_FBgn0035454 		0.761 0.758
dar1
M06172_2.00 		Drosophila melanogaster
NNNRCCACRCCCHNN
NNDGGGYGTGGYNNN		 B1H
Zhu et al.(2011)
CG12029_SOLEXA_5_FBgn0035454 		0.761 0.758
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000666600.1 C2H2 ZF 664 683
RSKR_0000666600.1 C2H2 ZF 689 713
RSKR_0000666600.1 C2H2 ZF 719 741

Links

Other C2H2 ZF family TFs
Other Rhabditophanes kr3021 TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSOARG00000012925 Ovis aries ENSOARG00000012925 I 0.793
GD13775 Drosophila simulans FBgn0185475 I 0.780
ENSXMAG00000006384 Xiphophorus maculatus ENSXMAG00000006384 I 0.778
ENSXMAG00000004738 Xiphophorus maculatus ENSXMAG00000004738 I 0.778
KLF6 Ornithorhynchus anatinus ENSOANG00000006083 I 0.778
ENSPFOG00000012096 Poecilia formosa ENSPFOG00000012096 I 0.778
Pvit_04085 Pogona vitticeps Pvit_04085 I 0.778
ENSPFOG00000013188 Poecilia formosa ENSPFOG00000013188 I 0.778
ENSGMOG00000008317 Gadus morhua ENSGMOG00000008317 I 0.778
KLF6 Anolis carolinensis ENSACAG00000001166 I 0.778
SMAR008306 Strigamia maritima SMAR008306 I 0.777
tetur02g04760 Tetranychus urticae tetur02g04760 I 0.777
KLF6 Pan troglodytes ENSPTRG00000002245 I 0.774
KLF6 Oryzias latipes ENSORLG00000005620 I 0.774
ENSSTOG00000007751 Ictidomys tridecemlineatus ENSSTOG00000007751 I 0.774
ENSLACG00000008816 Latimeria chalumnae ENSLACG00000008816 I 0.774
klf6.L Xenopus laevis XB-GENE-6254475 I 0.774
klf6.S Xenopus laevis XB-GENE-986307 I 0.774
KLF6 Gorilla gorilla ENSGGOG00000002055 I 0.774
ENSGMOG00000017786 Gadus morhua ENSGMOG00000017786 I 0.774
klf6 Xenopus tropicalis XB-GENE-986303 I 0.774
ENSPANG00000023515 Papio anubis ENSPANG00000023515 I 0.774
KLF6 Homo sapiens ENSG00000067082 D 0.774
klf6a Gasterosteus aculeatus ENSGACG00000001778 I 0.774
ENSSSCG00000028828 Sus scrofa ENSSSCG00000028828 I 0.774
ENSGALG00000007056 Gallus gallus ENSGALG00000007056 I 0.774
klf5l Gasterosteus aculeatus ENSGACG00000020841 I 0.774
KLF6 Ochotona princeps ENSOPRG00000009393 I 0.774
KLF6 Loxodonta africana ENSLAFG00000006756 I 0.774
KLF6 Takifugu rubripes ENSTRUG00000004632 I 0.774
Klf6 Mus musculus ENSMUSG00000000078 D 0.774
ENSMPUG00000016246 Mustela putorius furo ENSMPUG00000016246 I 0.774
klf6a Tetraodon nigroviridis ENSTNIG00000008726 I 0.774
ENSNLEG00000011149 Nomascus leucogenys ENSNLEG00000011149 I 0.774
KLF6 Tetraodon nigroviridis ENSTNIG00000007979 I 0.774
KLF6 Otolemur garnettii ENSOGAG00000012252 I 0.774
KLF6 Monodelphis domestica ENSMODG00000006714 I 0.774
KLF6 Macaca mulatta ENSMMUG00000010696 I 0.774
ENSONIG00000014953 Oreochromis niloticus ENSONIG00000014953 I 0.774
KLF6 Taeniopygia guttata ENSTGUG00000000906 I 0.774
ENSLOCG00000000413 Lepisosteus oculatus ENSLOCG00000000413 I 0.774
KLF6 Meleagris gallopavo ENSMGAG00000005794 I 0.774
KLF6 Myotis lucifugus ENSMLUG00000005411 I 0.774
klf6a Takifugu rubripes ENSTRUG00000011509 I 0.774
ENSONIG00000003645 Oreochromis niloticus ENSONIG00000003645 I 0.774
KLF6 Oryctolagus cuniculus ENSOCUG00000002470 I 0.774
KLF6 Felis catus ENSFCAG00000031745 I 0.774
Myotis_brandtii_Klf6_10019453 Myotis brandtii Myotis_brandtii_Klf6_10019453 I 0.774
KLF6 Canis familiaris ENSCAFG00000005354 I 0.774
ENSAPLG00000013717 Anas platyrhynchos ENSAPLG00000013717 I 0.774
Gfo_R008094 Geospiza fortis Gfo_R008094 I 0.774
KLF6 Callithrix jacchus ENSCJAG00000032379 I 0.774
ENSFALG00000007015 Ficedula albicollis ENSFALG00000007015 I 0.774
ENSP00000419923 Macaca fascicularis ENSP00000419923 I 0.774
Tal_R011480 Tyto alba Tal_R011480 I 0.774
ENSAMXG00000018929 Astyanax mexicanus ENSAMXG00000018929 I 0.774
ENSPSIG00000004079 Pelodiscus sinensis ENSPSIG00000004079 I 0.774
ENSAMEG00000003419 Ailuropoda melanoleuca ENSAMEG00000003419 I 0.774
KLF6 Pteropus vampyrus ENSPVAG00000004067 I 0.774
ENSAMXG00000012419 Astyanax mexicanus ENSAMXG00000012419 I 0.774
Klf6 Rattus norvegicus ENSRNOG00000016885 I 0.774
ENSPPYG00000002048 Pongo abelii ENSPPYG00000002048 I 0.774
ENSSHAG00000015687 Sarcophilus harrisii ENSSHAG00000015687 I 0.774
ENSCPOG00000009821 Cavia porcellus ENSCPOG00000009821 I 0.774
Aan_R013666 Calypte anna Aan_R013666 I 0.774
Klf6 Dipodomys ordii ENSDORG00000000712 I 0.774
KLF6 Dasypus novemcinctus ENSDNOG00000046042 I 0.774
TriadG18001 Trichoplax adhaerens TriadG18001 I 0.774
KLF6 Equus caballus ENSECAG00000023417 I 0.774
TriadG17953 Trichoplax adhaerens TriadG17953 I 0.774
KLF6 Echinops telfairi ENSETEG00000003746 I 0.774
ENSCSAG00000013954 Chlorocebus sabaeus ENSCSAG00000013954 I 0.774
Afo_R006979 Aptenodytes forsteri Afo_R006979 I 0.774
Cmyd_10012762 Chelonia mydas Cmyd_10012762 I 0.774
klf6a Danio rerio ENSDARG00000029072 I 0.774
klf6b Danio rerio ENSDARG00000038561 I 0.774
ENSP00000309570-D2 Bos grunniens ENSP00000309570-D2 I 0.774
Brh_R002470 Buceros rhinoceros Brh_R002470 I 0.774
ENSTGUG00000015172 Taeniopygia guttata ENSTGUG00000015172 I 0.773
ENSPFOG00000000768 Poecilia formosa ENSPFOG00000000768 I 0.770
ENSONIG00000013256 Oreochromis niloticus ENSONIG00000013256 I 0.770
ENSPMAG00000001851 Petromyzon marinus ENSPMAG00000001851 I 0.770
klf5l Tetraodon nigroviridis ENSTNIG00000004691 I 0.770
klf5l Oryzias latipes ENSORLG00000015385 I 0.770
ENSLACG00000016686 Latimeria chalumnae ENSLACG00000016686 I 0.770
klf5l Takifugu rubripes ENSTRUG00000009618 I 0.770
ENSGMOG00000014819 Gadus morhua ENSGMOG00000014819 I 0.770
ENSXMAG00000015343 Xiphophorus maculatus ENSXMAG00000015343 I 0.770
klf5l Danio rerio ENSDARG00000018757 I 0.770
ENSAMXG00000007093 Astyanax mexicanus ENSAMXG00000007093 I 0.770
ENSLOCG00000014951 Lepisosteus oculatus ENSLOCG00000014951 I 0.770
GD25946 Drosophila simulans FBgn0197223 I 0.769
CGI_10000441 Crassostrea gigas CGI_10000441 I 0.765
nAv.1.0.1.g05136 Acanthocheilonema viteae nAv.1.0.1.g05136 I 0.765
ACYPI000624 Acyrthosiphon pisum ACYPI000624 I 0.764
L596_g22597 Steinernema carpocapsae L596_g22597 I 0.763
Myotis_brandtii_KLF7_10028382 Myotis brandtii Myotis_brandtii_KLF7_10028382 I 0.762
ENSP00000309570 Macaca fascicularis ENSP00000309570 I 0.762
KLF7 Sorex araneus ENSSARG00000007376 I 0.762
KLF7 Pteropus vampyrus ENSPVAG00000006542 I 0.762
klf7 Xenopus tropicalis XB-GENE-1012735 I 0.762
KLF7 Pan troglodytes ENSPTRG00000012850 I 0.762
klf7a Tetraodon nigroviridis ENSTNIG00000008332 I 0.762
Sakowv30006378m.g Saccoglossus kowalevskii Sakowv30006378m.g I 0.762
ENSSHAG00000015861 Sarcophilus harrisii ENSSHAG00000015861 I 0.762
estExt_fgenesh2_pg.C_1540054 Branchiostoma floridae estExt_fgenesh2_pg.C_1540054 I 0.762
XP_002157385.1 Hydra magnipapillata XP_002157385.1 I 0.762
ENSSTOG00000011069 Ictidomys tridecemlineatus ENSSTOG00000011069 I 0.762
KLF7 Vicugna pacos ENSVPAG00000007495 I 0.762
ENSXMAG00000001299 Xiphophorus maculatus ENSXMAG00000001299 I 0.762
KLF7 Tursiops truncatus ENSTTRG00000014444 I 0.762
KLF7 Sus scrofa ENSSSCG00000029998 I 0.762
ML25776a Mnemiopsis leidyi ML25776a I 0.762
ISCW016993 Ixodes scapularis ISCW016993 I 0.762
klf7a Takifugu rubripes ENSTRUG00000008149 I 0.762
KLF7 Taeniopygia guttata ENSTGUG00000010017 I 0.762
ENSPFOG00000015451 Poecilia formosa ENSPFOG00000015451 I 0.762
KLF7 Gorilla gorilla ENSGGOG00000009338 I 0.762
Klf7 Dipodomys ordii ENSDORG00000009634 I 0.762
KLF7 Equus caballus ENSECAG00000012215 I 0.762
KLF7 Echinops telfairi ENSETEG00000014513 I 0.762
ENSLACG00000014655 Latimeria chalumnae ENSLACG00000014655 I 0.762
KLF7 Loxodonta africana ENSLAFG00000005822 I 0.762
KLF7 Macaca mulatta ENSMMUG00000000190 I 0.762
KLF7 Myotis lucifugus ENSMLUG00000009436 I 0.762
KLF7 Meleagris gallopavo ENSMGAG00000008396 I 0.762
ENSMEUG00000010085 Macropus eugenii ENSMEUG00000010085 I 0.762
ENSFALG00000003989 Ficedula albicollis ENSFALG00000003989 I 0.762
KLF7 Canis familiaris ENSCAFG00000013485 I 0.762
KLF7 Anolis carolinensis ENSACAG00000009642 I 0.762
KLF7 Homo sapiens ENSG00000118263 D 0.762
ENSPSIG00000005254 Pelodiscus sinensis ENSPSIG00000005254 I 0.762
KLF7 Gasterosteus aculeatus ENSGACG00000002124 I 0.762
ENSAMEG00000015148 Ailuropoda melanoleuca ENSAMEG00000015148 I 0.762
ENSAMXG00000015449 Astyanax mexicanus ENSAMXG00000015449 I 0.762
KLF7 Felis catus ENSFCAG00000002514 I 0.762
KLF7 Gallus gallus ENSGALG00000008501 I 0.762
klf7a Gasterosteus aculeatus ENSGACG00000014720 I 0.762
ENSMPUG00000000483 Mustela putorius furo ENSMPUG00000000483 I 0.762
KLF7 Monodelphis domestica ENSMODG00000015982 I 0.762
ENSCSAG00000010117 Chlorocebus sabaeus ENSCSAG00000010117 I 0.762
ENSPFOG00000013890 Poecilia formosa ENSPFOG00000013890 I 0.762
ENSPANG00000005240 Papio anubis ENSPANG00000005240 I 0.762
ENSAPLG00000006752 Anas platyrhynchos ENSAPLG00000006752 I 0.762
KLF7 Cavia porcellus ENSCPOG00000009080 I 0.762
ACYPI23999 Acyrthosiphon pisum ACYPI23999 I 0.762
ENSPPYG00000013114 Pongo abelii ENSPPYG00000013114 I 0.762
KLF7 Bos taurus ENSBTAG00000044097 I 0.762
KLF7 Callithrix jacchus ENSCJAG00000006023 I 0.762
klf7a Oryzias latipes ENSORLG00000002366 I 0.762
KLF7 Ochotona princeps ENSOPRG00000001119 I 0.762
ENSNLEG00000007123 Nomascus leucogenys ENSNLEG00000007123 I 0.762
klf7a Danio rerio ENSDARG00000073857 I 0.762
KLF7 Dasypus novemcinctus ENSDNOG00000035718 I 0.762
Klf7 Mus musculus ENSMUSG00000025959 D 0.762
KLF7 Ornithorhynchus anatinus ENSOANG00000009359 I 0.762
KLF7 Oryctolagus cuniculus ENSOCUG00000009813 I 0.762
ENSONIG00000017091 Oreochromis niloticus ENSONIG00000017091 I 0.762
ENSONIG00000013381 Oreochromis niloticus ENSONIG00000013381 I 0.762
klf7b Danio rerio ENSDARG00000043821 I 0.762
KLF7 Otolemur garnettii ENSOGAG00000017014 I 0.762
Ocbimv22021283m.g Octopus bimaculoides Ocbimv22021283m.g I 0.761
LCUP013827 Lucilia cuprina LCUP013827 I 0.761
KGM_10879 Danaus plexippus KGM_10879 I 0.761
MDOA012204 Musca domestica MDOA012204 I 0.761
GI12500 Drosophila mojavensis FBgn0135257 I 0.761
GM14583 Drosophila sechellia FBgn0169504 I 0.761
GG15151 Drosophila erecta FBgn0107404 I 0.761
GF24217 Drosophila ananassae FBgn0101211 I 0.761
nDi.2.2.2.g06335 Dirofilaria immitis nDi.2.2.2.g06335 I 0.761
BXY_0235800 Bursaphelenchus xylophilus BXY_0235800 I 0.761
GJ12406 Drosophila virilis FBgn0199649 I 0.761
GH16421 Drosophila grimshawi FBgn0123892 I 0.761
dar1 Drosophila melanogaster FBgn0263239 D 0.761
GK20520 Drosophila willistoni FBgn0222517 I 0.761
ISCW016565 Ixodes scapularis ISCW016565 I 0.761
GE21373 Drosophila yakuba FBgn0238635 I 0.761
EEL_0000852101 Elaeophora elaphi EEL_0000852101 I 0.758
Aqu1.216622 Amphimedon queenslandica Aqu1.216622 I 0.758
AGAP007038 Anopheles gambiae AGAP007038 I 0.758
NBR_0001426101 Nippostrongylus brasiliensis NBR_0001426101 I 0.758
ANCDUO_04077 Ancylostoma duodenale ANCDUO_04077 I 0.758
HPLM_0000852701 Haemonchus placei HPLM_0000852701 I 0.758
ACAC_0001026501 Angiostrongylus cantonensis ACAC_0001026501 I 0.758
estExt_fgenesh2_pg.C_20014 Branchiostoma floridae estExt_fgenesh2_pg.C_20014 I 0.758
estExt_GenewiseH_1.C_3260070 Branchiostoma floridae estExt_GenewiseH_1.C_3260070 I 0.758
CGI_10021556 Crassostrea gigas CGI_10021556 I 0.758
DAPPUDRAFT_310992 Daphnia pulex DAPPUDRAFT_310992 I 0.758
ENSAMXG00000016670 Astyanax mexicanus ENSAMXG00000016670 I 0.758
ACOC_0001313301 Angiostrongylus costaricensis ACOC_0001313301 I 0.758
ML00922a Mnemiopsis leidyi ML00922a I 0.758
ENSONIG00000000547 Oreochromis niloticus ENSONIG00000000547 I 0.758
klf5a Tetraodon nigroviridis ENSTNIG00000017039 I 0.758
ENSXMAG00000018258 Xiphophorus maculatus ENSXMAG00000018258 I 0.758
GB52133 Apis mellifera GB52133 I 0.758
klf5a Oryzias latipes ENSORLG00000005490 I 0.758
AAEL010126 Aedes aegypti AAEL010126 I 0.758
ENSPMAG00000005136 Petromyzon marinus ENSPMAG00000005136 I 0.758
ENSPMAG00000002310 Petromyzon marinus ENSPMAG00000002310 I 0.758
ENSPFOG00000018043 Poecilia formosa ENSPFOG00000018043 I 0.758
ENSSHAG00000002482 Sarcophilus harrisii ENSSHAG00000002482 I 0.758
zf(c2h2)-24 Ciona intestinalis ENSCING00000012142 I 0.758
LOAG_17097 Loa loa LOAG_17097 N 0.758
SPU_012772 Strongylocentrotus purpuratus SPU_012772 I 0.758
SPU_017470 Strongylocentrotus purpuratus SPU_017470 I 0.758
tetur01g11740 Tetranychus urticae tetur01g11740 I 0.758
ENSCSAVG00000006620 Ciona savignyi ENSCSAVG00000006620 I 0.758
NEMVEDRAFT_v1g107193 Nematostella vectensis NEMVEDRAFT_v1g107193 I 0.758
Ppa-klf-1 Pristionchus pacificus PPA04120 I 0.758
NEMVEDRAFT_v1g236177 Nematostella vectensis NEMVEDRAFT_v1g236177 I 0.758
NV16008 Nasonia vitripennis NV16008 I 0.758
NEMVEDRAFT_v1g229565 Nematostella vectensis NEMVEDRAFT_v1g229565 I 0.758
Tal_R009434 Tyto alba Tal_R009434 I 0.757
GL21001 Drosophila persimilis FBgn0158596 I 0.757
klf5b Tetraodon nigroviridis ENSTNIG00000014985 I 0.757
Aan_R000801 Calypte anna Aan_R000801 I 0.757