CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RSKR_0001095800
(
Rhabditophanes kr3021
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
RSKR_0001095800
T155928_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pat-9
M00620_2.00
Caenorhabditis elegans
NDKTKTAAHN
NDTTAMAMHN
PBM
Narasimhan et al.(2015)
pTH10808
0.815
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0001095800.1
C2H2 ZF
84
106
YPCSLCSSKFGSKMELEEHQNSH
RSKR_0001095800.1
C2H2 ZF
112
134
FECDICHSRFNRRSTLWNHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Rhabditophanes kr3021
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy