scaffold395-EXSNAP2012.4 (Pristionchus exspectatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 scaffold395-EXSNAP2012.4 T156073_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
odd-2
M00618_2.00 		Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN		 PBM
Narasimhan et al.(2015)
pTH9150 		0.766 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold395-EXSNAP2012.4 C2H2 ZF 186 208
scaffold395-EXSNAP2012.4 C2H2 ZF 214 236
scaffold395-EXSNAP2012.4 C2H2 ZF 242 264

Links

Other C2H2 ZF family TFs
Other Pristionchus exspectatus TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ppa-odd-1 Pristionchus pacificus PPA09938 I 0.827
NBR_0000990501 Nippostrongylus brasiliensis NBR_0000990501 I 0.793
DICVIV_08037 Dictyocaulus viviparus DICVIV_08037 I 0.793
NECAME_08408 Necator americanus NECAME_08408 I 0.790
ANCCAN_29852 Ancylostoma caninum ANCCAN_29852 I 0.786
ACAC_0000529401 Angiostrongylus cantonensis ACAC_0000529401 I 0.786
ANCCEY_10108 Ancylostoma ceylanicum ANCCEY_10108 I 0.786
ACOC_0001130401 Angiostrongylus costaricensis ACOC_0001130401 I 0.786
ANCDUO_21978 Ancylostoma duodenale ANCDUO_21978 I 0.786
nDi.2.2.2.g05871 Dirofilaria immitis nDi.2.2.2.g05871 I 0.777
DME_0000745901 Dracunculus medinensis DME_0000745901 I 0.777
HPLM_0001493201 Haemonchus placei HPLM_0001493201 I 0.775
HCOI00889400 Haemonchus contortus HCOI00889400 I 0.775
TCNE_0000229401 Toxocara canis TCNE_0000229401 I 0.774
EEL_0000443001 Elaeophora elaphi EEL_0000443001 I 0.774
nOo.2.0.1.g01159 Onchocerca ochengi nOo.2.0.1.g01159 I 0.774
nAv.1.0.1.g06169 Acanthocheilonema viteae nAv.1.0.1.g06169 I 0.774
GPUH_0001513701 Gongylonema pulchrum GPUH_0001513701 I 0.774
ASU_07002 Ascaris suum ASU_07002 I 0.774
WBGene00239217 Onchocerca volvulus WBGene00239217 I 0.774
LOAG_00579 Loa loa LOAG_00579 I 0.774
nLs.2.1.2.g06827 Litomosoides sigmodontis nLs.2.1.2.g06827 I 0.771
Bm9236 Brugia malayi Bm9236 I 0.770
BTMF_0000075201 Brugia timori BTMF_0000075201 I 0.770
EVEC_0001078501 Enterobius vermicularis EVEC_0001078501 I 0.769
SMUV_0000818001 Syphacia muris SMUV_0000818001 I 0.769
CBN15373 Caenorhabditis brenneri CBN15373 I 0.766
odd-2 Caenorhabditis elegans WBGene00003846 D 0.766
CJA04579 Caenorhabditis japonica CJA04579 I 0.766
CBG14844 Caenorhabditis briggsae CBG14844 I 0.762
CRE00192 Caenorhabditis remanei CRE00192 I 0.762
LotgiG130661 Lottia gigantea LotgiG130661 I 0.757