CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000108101
(
Syphacia muris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMUV_0000108101
T156413_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klf-3
M00617_2.00
Caenorhabditis elegans
NHMCGCCCH
DGGGCGKDN
PBM
Narasimhan et al.(2015)
pTH9072
0.763
0.739
KLF1
M00226_2.00
Homo sapiens
CMCGCCCM
KGGGCGKG
PBM
Barrera et al.(2016)
KLF1_REF
0.760
0.783
KLF1
M08293_2.00
Homo sapiens
NVNNNRCCMCRCCCH
DGGGYGKGGYNNNBN
ChIP-seq
Schmitges et al.(2016)
Q13351.MEME
0.760
0.783
KLF1
M08871_2.00
Homo sapiens
SVNDGCCMCRCCCH
DGGGYGKGGCHNBS
Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A
0.760
0.783
KLF1
M10163_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5_01
0.760
0.783
KLF1
M10164_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5
0.760
0.783
KLF1
M00224_2.00
Homo sapiens
YMCGCCCH
DGGGCGKR
PBM
Barrera et al.(2016)
KLF1_H299Y
0.760
0.768
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000108101-mRNA-1
C2H2 ZF
204
228
HCCPYPECEKRYSKSSHLKAHLRTH
SMUV_0000108101-mRNA-1
C2H2 ZF
234
258
YCCNWPDCGWKFARSDELTRHYRKH
SMUV_0000108101-mRNA-1
C2H2 ZF
264
286
FRCSFCERAFSRSDHLGLHLKRH
Links
Other
C2H2 ZF
family TFs
Other
Syphacia muris
TFs
85 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EVEC_0000950401
Enterobius vermicularis
EVEC_0000950401
I
0.808
SBAD_0000267001
Soboliphyme baturini
SBAD_0000267001
I
0.779
HCOI00079800
Haemonchus contortus
HCOI00079800
I
0.767
HCOI00075700
Haemonchus contortus
HCOI00075700
I
0.767
DICVIV_04886
Dictyocaulus viviparus
DICVIV_04886
I
0.767
ASIM_0001887501
Anisakis simplex
ASIM_0001887501
I
0.767
ALUE_0001029501
Ascaris lumbricoides
ALUE_0001029501
I
0.767
ASIM_0000327401
Anisakis simplex
ASIM_0000327401
I
0.767
HPLM_0000358501
Haemonchus placei
HPLM_0000358501
I
0.767
ASU_13892
Ascaris suum
ASU_13892
I
0.767
ANCCEY_05272
Ancylostoma ceylanicum
ANCCEY_05272
I
0.767
NECAME_03970
Necator americanus
NECAME_03970
I
0.767
KLF1
Oryctolagus cuniculus
ENSOCUG00000011998
I
0.764
CapteG137485
Capitella teleta
CapteG137485
I
0.764
CLEC010043
Cimex lectularius
CLEC010043
I
0.764
ENSTRUG00000007828
Takifugu rubripes
ENSTRUG00000007828
I
0.764
TCLT_0000033501
Thelazia callipaeda
TCLT_0000033501
I
0.763
klf-3
Caenorhabditis elegans
WBGene00003480
D
0.763
CJA34076
Caenorhabditis japonica
CJA34076
I
0.763
WBGene00246545
Onchocerca volvulus
WBGene00246545
N
0.763
ENSLOCG00000014956
Lepisosteus oculatus
ENSLOCG00000014956
I
0.763
CBG04311
Caenorhabditis briggsae
CBG04311
I
0.763
EVEC_0001049001
Enterobius vermicularis
EVEC_0001049001
I
0.763
nDi.2.2.2.g03895
Dirofilaria immitis
nDi.2.2.2.g03895
N
0.763
CBN12606
Caenorhabditis brenneri
CBN12606
I
0.763
CBN19589
Caenorhabditis brenneri
CBN19589
I
0.763
CRE26517
Caenorhabditis remanei
CRE26517
I
0.763
ASU_08391
Ascaris suum
ASU_08391
I
0.763
CGI_10010790
Crassostrea gigas
CGI_10010790
I
0.763
AARA000098
Anopheles arabiensis
AARA000098
I
0.760
AATE020384
Anopheles atroparvus
AATE020384
I
0.760
ENSMMUP00000014716
Macaca fascicularis
ENSMMUP00000014716
I
0.760
ENSBTAP00000043340-D1
Bos grunniens
ENSBTAP00000043340-D1
I
0.760
SNAPOd2T00013472001
Oikopleura dioica
SNAPOd2T00013472001
I
0.760
AALB010205
Anopheles albimanus
AALB010205
I
0.760
ACOM041708
Anopheles coluzzii
ACOM041708
I
0.760
AMIN001268
Anopheles minimus
AMIN001268
I
0.760
AQUA001297
Anopheles quadriannulatus
AQUA001297
I
0.760
ASTEI07110
Anopheles stephensi
ASTEI07110
I
0.760
LotgiG79321
Lottia gigantea
LotgiG79321
I
0.760
AMEM014876
Anopheles merus
AMEM014876
I
0.760
AFUN011554
Anopheles funestus
AFUN011554
I
0.760
ACUA022835
Anopheles culicifacies
ACUA022835
I
0.760
ADIR011723
Anopheles dirus
ADIR011723
I
0.760
AFAF003290
Anopheles farauti
AFAF003290
I
0.760
ACHR001612
Anopheles christyi
ACHR001612
I
0.760
KLF1
Sus scrofa
ENSSSCG00000013730
I
0.760
zf(c2h2)-23
Ciona intestinalis
ENSCING00000014976
I
0.760
KLF1
Canis familiaris
ENSCAFG00000017111
I
0.760
KLF1
Bos taurus
ENSBTAG00000006083
I
0.760
KLF1
Callithrix jacchus
ENSCJAG00000004762
I
0.760
KLF1
Cavia porcellus
ENSCPOG00000000784
I
0.760
KLF1
Felis catus
ENSFCAG00000026066
I
0.760
ENSCSAVG00000002903
Ciona savignyi
ENSCSAVG00000002903
I
0.760
ENSCSAG00000006545
Chlorocebus sabaeus
ENSCSAG00000006545
I
0.760
ENSAMXG00000010015
Astyanax mexicanus
ENSAMXG00000010015
I
0.760
ENSAMEG00000012407
Ailuropoda melanoleuca
ENSAMEG00000012407
I
0.760
AGAP010520
Anopheles gambiae
AGAP010520
I
0.760
ADAC003701
Anopheles darlingi
ADAC003701
I
0.760
AAEL004806
Aedes aegypti
AAEL004806
I
0.760
BGIBMGA002047
Bombyx mori
BGIBMGA002047
I
0.760
CPIJ004724
Culex quinquefasciatus
CPIJ004724
I
0.760
ENSACAG00000008367
Anolis carolinensis
ENSACAG00000008367
I
0.760
DAPPUDRAFT_27999
Daphnia pulex
DAPPUDRAFT_27999
I
0.760
KGM_08807
Danaus plexippus
KGM_08807
I
0.760
KLF1
Homo sapiens
ENSG00000105610
D
0.760
ENSPFOG00000011224
Poecilia formosa
ENSPFOG00000011224
I
0.760
KLF1
Procavia capensis
ENSPCAG00000015589
I
0.760
KLF1
Ochotona princeps
ENSOPRG00000004951
I
0.760
ENSPPYG00000009612
Pongo abelii
ENSPPYG00000009612
I
0.760
KLF1
Pan troglodytes
ENSPTRG00000010547
I
0.760
HMEL003963
Heliconius melpomene
HMEL003963
I
0.760
KLF1
Tupaia belangeri
ENSTBEG00000013433
I
0.760
CpipJ_CPIJ004724
Culex pipiens
CpipJ_CPIJ004724
I
0.760
KLF1
Gorilla gorilla
ENSGGOG00000003408
I
0.760
KLF1
Otolemur garnettii
ENSOGAG00000025438
I
0.760
KLF1
Myotis lucifugus
ENSMLUG00000012751
I
0.760
KLF1
Microcebus murinus
ENSMICG00000016260
I
0.760
KLF1
Loxodonta africana
ENSLAFG00000016145
I
0.760
ENSNLEG00000012868
Nomascus leucogenys
ENSNLEG00000012868
I
0.760
KLF1
Macaca mulatta
ENSMMUG00000011230
I
0.760
ENSMPUG00000004544
Mustela putorius furo
ENSMPUG00000004544
I
0.760
ENSMODG00000010888
Monodelphis domestica
ENSMODG00000010888
I
0.760
ANCDUO_09307
Ancylostoma duodenale
ANCDUO_09307
I
0.759
HPBE_0001838801
Heligmosomoides bakeri
HPBE_0001838801
I
0.759