SVE_1713000 (Strongyloides venezuelensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SVE_1713000 T157432_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Blimp-1
M03692_2.00
Drosophila melanogaster
NNYACTTTCVYYN

NRRBGAAAGTRNN
SELEX
Nitta et al.(2015)
Blimp-1_1
0.756 0.798
Blimp-1
M06141_2.00
Drosophila melanogaster
ACTTTCACTTTY

RAAAGTGAAAGT
B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625
0.756 0.798
Blimp-1
M06142_2.00
Drosophila melanogaster
RCTTTCMCTTTY

RAAAGKGAAAGY
B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625
0.756 0.798
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVE_1713000.1 C2H2 ZF 640 662
SVE_1713000.1 C2H2 ZF 668 690
SVE_1713000.1 C2H2 ZF 696 718
SVE_1713000.1 C2H2 ZF 724 746
SVE_1713000.1 C2H2 ZF 752 773

Links

Other C2H2 ZF family TFs
Other Strongyloides venezuelensis TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ncoa1 Xenopus tropicalis XB-GENE-494349 N 0.000
ENSSHAG00000003234 Sarcophilus harrisii ENSSHAG00000003234 N 0.000
NCOA1 Sorex araneus ENSSARG00000014416 N 0.000
Ncoa1 Rattus norvegicus ENSRNOG00000004068 N 0.000
NCOA1 Pteropus vampyrus ENSPVAG00000017511 N 0.000
ENSPSIG00000007514 Pelodiscus sinensis ENSPSIG00000007514 N 0.000
ENSPPYG00000012598 Pongo abelii ENSPPYG00000012598 N 0.000
ENSPANG00000016229 Papio anubis ENSPANG00000016229 N 0.000
NCOA1 Otolemur garnettii ENSOGAG00000000754 N 0.000
NCOA1 Oryctolagus cuniculus ENSOCUG00000015422 N 0.000
ENSOARG00000018040 Ovis aries ENSOARG00000018040 N 0.000
NCOA1 Sus scrofa ENSSSCG00000008581 N 0.000
NCOA1 Tupaia belangeri ENSTBEG00000006393 N 0.000
Pvit_14468 Pogona vitticeps Pvit_14468 N 0.000
Myotis_brandtii_NCOA1_10031247 Myotis brandtii Myotis_brandtii_NCOA1_10031247 N 0.000
ENSP00000385216 Macaca fascicularis ENSP00000385216 N 0.000
ENSP00000320940-D1 Bos grunniens ENSP00000320940-D1 N 0.000
Cmyd_10021484 Chelonia mydas Cmyd_10021484 N 0.000
Brh_R012327 Buceros rhinoceros Brh_R012327 N 0.000
Alligator_sinensis_CCG016737.3 Alligator sinensis Alligator_sinensis_CCG016737.3 N 0.000
Afo_R011828 Aptenodytes forsteri Afo_R011828 N 0.000
NCOA1 Tursiops truncatus ENSTTRG00000015113 N 0.000
ENSTSYG00000010360 Tarsius syrichta ENSTSYG00000010360 N 0.000
ENSNLEG00000000895 Nomascus leucogenys ENSNLEG00000000895 N 0.000
Ncoa1 Mus musculus ENSMUSG00000020647 N 0.000
ENSMPUG00000014013 Mustela putorius furo ENSMPUG00000014013 N 0.000
NCOA1 Equus caballus ENSECAG00000017819 N 0.000
NCOA1 Dasypus novemcinctus ENSDNOG00000009924 N 0.000
ENSCSAG00000008479 Chlorocebus sabaeus ENSCSAG00000008479 N 0.000
NCOA1 Cavia porcellus ENSCPOG00000001117 N 0.000
NCOA1 Callithrix jacchus ENSCJAG00000007912 N 0.000
NCOA1 Choloepus hoffmanni ENSCHOG00000004072 N 0.000
NCOA1 Canis familiaris ENSCAFG00000004075 N 0.000
NCOA1 Bos taurus ENSBTAG00000015007 N 0.000
ENSAPLG00000013551 Anas platyrhynchos ENSAPLG00000013551 N 0.000
ENSAMEG00000002653 Ailuropoda melanoleuca ENSAMEG00000002653 N 0.000
NCOA1 Erinaceus europaeus ENSEEUG00000011176 N 0.000
NCOA1 Echinops telfairi ENSETEG00000013375 N 0.000
NCOA1 Monodelphis domestica ENSMODG00000015907 N 0.000
NCOA1 Macaca mulatta ENSMMUG00000020838 N 0.000
NCOA1 Myotis lucifugus ENSMLUG00000014119 N 0.000
ENSMICG00000001567 Microcebus murinus ENSMICG00000001567 N 0.000
NCOA1 Meleagris gallopavo ENSMGAG00000014153 N 0.000
NCOA1 Loxodonta africana ENSLAFG00000014442 N 0.000
NCOA1 Gorilla gorilla ENSGGOG00000011279 N 0.000
NCOA1 Gallus gallus ENSGALG00000016617 N 0.000
NCOA1 Homo sapiens ENSG00000084676 N 0.000
ENSFALG00000010745 Ficedula albicollis ENSFALG00000010745 N 0.000
NCOA1 Anolis carolinensis ENSACAG00000000619 N 0.000