CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_20387
(
Neurospora discreta
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
estExt_Genewise1.C_20387
T158796_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02173
M01893_2.00
Neurospora crassa
NNRKTSSGGVNN
NNBCCSSAMYNN
PBM
Weirauch et al.(2014)
pTH9665
0.976
0.976
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_20387
C2H2 ZF
114
136
HVCQICKRVYERADHLTRHLRSH
estExt_Genewise1.C_20387
C2H2 ZF
142
164
YQCTRCPKRFNRADLLTRHETTH
estExt_Genewise1.C_20387
Zinc cluster
184
222
EACLNCAMSKAKCDDMKPCTRCRLKNLICETSNKKTPHY
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Neurospora discreta
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCU02173
Neurospora crassa
NCU02173
D
0.976
fgenesh1_pm.sca_2_chr3_3_0000229
Nectria haematococca
fgenesh1_pm.sca_2_chr3_3_0000229
I
0.765
VHEMI04212
Torrubiella hemipterigena
VHEMI04212
I
0.718
SMAC_05275
Sordaria macrospora
SMAC_05275
I
0.953
SAPIO_CDS9919
Scedosporium apiospermum
SAPIO_CDS9919
I
0.741
NEUTE1DRAFT_149310
Neurospora tetrasperma
NEUTE1DRAFT_149310
I
0.976
NechaG91829
Fusarium solani
NechaG91829
I
0.765
GLRG_02566
Colletotrichum graminicola
GLRG_02566
I
0.798
FVEG_01911
Fusarium verticillioides
FVEG_01911
I
0.776
FPSE_11956
Fusarium pseudograminearum
FPSE_11956
I
0.776
FOXG_03048
Fusarium oxysporum
FOXG_03048
I
0.776
FGRRES_08791
Fusarium graminearum
FGRRES_08791
I
0.776
FFUJ_06263
Fusarium fujikuroi
FFUJ_06263
I
0.776
CH063_11331
Colletotrichum higginsianum
CH063_11331
I
0.812
CGGC5_4998
Colletotrichum gloeosporioides
CGGC5_4998
I
0.812
CFIO01_06545
Colletotrichum fioriniae
CFIO01_06545
I
0.812