CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_Genewise1Plus.C_60463
(
Cryphonectria parasitica
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
estExt_Genewise1Plus.C_60463
T158816_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02787
M01894_2.00
Neurospora crassa
NNNNCGGRW
WYCCGNNNN
PBM
Weirauch et al.(2014)
pTH9671
0.771
0.771
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_60463
C2H2 ZF
140
162
YQCADCLKRYSRPEHLQRHVATH
estExt_Genewise1Plus.C_60463
C2H2 ZF
168
190
FVCDVCGKAFGRADLLKRHRANH
estExt_Genewise1Plus.C_60463
Zinc cluster
213
249
HACQACAKARVKCEDTKPCTRCRHRNLTCEYASSEAG
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy