CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000008399
(
Latimeria chalumnae
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01530 (zf-C2HC)
IPR002515
ENSLACG00000008399
T159048_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ztf-11
M00650_2.00
Caenorhabditis elegans
VAAGTTTN
NAAACTTB
PBM
Narasimhan et al.(2015)
pTH9925
0.772
0.772
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000009524
C2HC ZF
80
107
KCPTPGCDGTGHVTGLYPHHRSLSGCPH
ENSLACP00000009524
C2HC ZF
124
152
KCPTPGCTGRGHVNSNRSTHRSLSGCPIA
ENSLACP00000009525
C2HC ZF
79
106
KCPTPGCDGTGHVTGLYPHHRSLSGCPH
ENSLACP00000009525
C2HC ZF
123
151
KCPTPGCTGRGHVNSNRSTHRSLSGCPIA
ENSLACP00000021846
C2HC ZF
488
515
KCPTPGCDGTGHVTGLYPHHRSLSGCPH
ENSLACP00000021846
C2HC ZF
532
560
KCPTPGCTGRGHVNSNRSTHRSLSGCPIA
ENSLACP00000021846
C2HC ZF
845
873
TCPTPGCDGSGHVTGNYASHRSVSGCPLA
ENSLACP00000021846
C2HC ZF
889
917
KCPTPGCDGSGHVTGNYASHRSLSGCPRA
ENSLACP00000021846
C2HC ZF
937
965
TCPVLGCDGQGHISGKYTSHRSASGCPLA
ENSLACP00000021846
C2HC ZF
990
1017
HCPLPGCNGLGHVNNVFVTHRSLSGCPL
Links
Other
C2HC ZF
family TFs
Other
Latimeria chalumnae
TFs
237 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy