POPTR_0010s15160 (Populus trichocarpa)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 POPTR_0010s15160 T163340_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.904 0.904
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0010s15160.1 CG-1 31 145

Links

Other CG-1 family TFs
Other Populus trichocarpa TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OBART01G00550 Oryza barthii OBART01G00550 N 0.000
OB01G10500 Oryza brachyantha OB01G10500 N 0.000
ORGLA07G0232500 Oryza glaberrima ORGLA07G0232500 N 0.000
ORGLA01G0004600 Oryza glaberrima ORGLA01G0004600 N 0.000
OGLUM01G00570 Oryza glumaepatula OGLUM01G00570 N 0.000
BGIOSGA002604 Oryza indica BGIOSGA002604 N 0.000
BGIOSGA002612 Oryza indica BGIOSGA002612 N 0.000
OMERI01G00020 Oryza meridionalis OMERI01G00020 N 0.000
ONIVA01G00510 Oryza nivara ONIVA01G00510 N 0.000
ORUFI01G00540 Oryza rufipogon ORUFI01G00540 N 0.000