Ciclev10029792m.g (Citrus clementina)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Ciclev10029792m.g T163511_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMTA2
M01901_2.00 		Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN		 PBM
Weirauch et al.(2014)
pTH7506 		0.909 0.909
EICBP.B
M06828_2.00 		Arabidopsis thaliana
DARVCGCGTKDD
HHMACGCGBYTH		 Dap-seq
OMalley et al.(2016)
CAMTA1_col_a 		0.818 0.818
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10029792m CG-1 79 111

Links

Other CG-1 family TFs
Other Citrus clementina TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g001406m.g Citrus sinensis orange1.1g001406m.g I 1.000
Bra037769 Brassica rapa Bra037769 I 0.939
Gorai.013G061100 Gossypium raimondii Gorai.013G061100 I 0.939
Bo9g018010 Brassica oleracea Bo9g018010 I 0.939
Thhalv10003564m.g Eutrema salsugineum Thhalv10003564m.g I 0.939
TCM_007482 Theobroma cacao TCM_007482 I 0.909
Bostr.0568s0382 Boechera stricta Bostr.0568s0382 I 0.909
Cagra.0248s0103 Capsella grandiflora Cagra.0248s0103 I 0.909
cassava1518.valid.m1 Manihot esculenta cassava1518.valid.m1 I 0.909
Carubv10025787m.g Capsella rubella Carubv10025787m.g I 0.909
CMTA2 Arabidopsis thaliana AT5G64220 D 0.909
scaffold_803130.1 Arabidopsis lyrata scaffold_803130.1 I 0.909
Thhalv10012552m.g Eutrema salsugineum Thhalv10012552m.g I 0.909
Gorai.005G220600 Gossypium raimondii Gorai.005G220600 I 0.879
Solyc04g056270.2 Solanum lycopersicum Solyc04g056270.2 I 0.879
mgf024932m Mimulus guttatus mgf024932m I 0.879
GSMUA_Achr3G21310_001 Musa acuminata GSMUA_Achr3G21310_001 I 0.848
Ca_05255 Cicer arietinum Ca_05255 I 0.848
GSMUA_Achr6G10390_001 Musa acuminata GSMUA_Achr6G10390_001 I 0.848
EICBP.B Arabidopsis lyrata fgenesh2_kg.6__888__AT5G09410.2 I 0.848
Eucgr.I02662 Eucalyptus grandis Eucgr.I02662 I 0.848
GRMZM2G447551 Zea mays GRMZM2G447551 I 0.848
PK04004.1 Cannabis sativa PK04004.1 I 0.818
Pavir.Ib02991 Panicum virgatum Pavir.Ib02991 I 0.818
Cucsa.217940 Cucumis sativus Cucsa.217940 I 0.818
Pm002007 Prunus mume Pm002007 I 0.818
EICBP.B Arabidopsis thaliana AT5G09410 D 0.818
SapurV1A.0039s0030 Salix purpurea SapurV1A.0039s0030 I 0.818
Bo9g174050 Brassica oleracea Bo9g174050 I 0.818
Bra009382 Brassica rapa Bra009382 I 0.818
chr4.CM0182.510.nc Lotus japonicus chr4.CM0182.510.nc I 0.818
Pavir.Ia02749 Panicum virgatum Pavir.Ia02749 I 0.818
GLYMA05G24430 Glycine max GLYMA05G24430 I 0.818
GLYMA15G05900 Glycine max GLYMA15G05900 I 0.818
GLYMA08G19101 Glycine max GLYMA08G19101 I 0.818
GSMUA_AchrUn_randomG02100_001 Musa acuminata GSMUA_AchrUn_randomG02100_001 I 0.818
GRMZM2G341747 Zea mays GRMZM2G341747 I 0.818
GRMZM2G153594 Zea mays GRMZM2G153594 I 0.818
Sb0012s010230 Sorghum bicolor Sb0012s010230 I 0.818
POPTR_0007s05410 Populus trichocarpa POPTR_0007s05410 I 0.788
TCM_001108 Theobroma cacao TCM_001108 I 0.788
AMTR_s00038p00173360 Amborella trichopoda AMTR_s00038p00173360 I 0.788
Sb01g044480 Sorghum bicolor Sb01g044480 I 0.788
OB03G16740 Oryza brachyantha OB03G16740 I 0.788
Lus10003405.g Linum usitatissimum Lus10003405.g I 0.788
GSMUA_AchrUn_randomG08930_001 Musa acuminata GSMUA_AchrUn_randomG08930_001 I 0.788
LPERR10G05550 Leersia perrieri LPERR10G05550 I 0.788
MDP0000139862 Malus domestica MDP0000139862 I 0.788
Eucgr.I02632 Eucalyptus grandis Eucgr.I02632 I 0.788
chr4.LjT13D08.100.nd Lotus japonicus chr4.LjT13D08.100.nd I 0.788
Cla013051 Citrullus lanatus Cla013051 I 0.788
Ciclev10004234m.g Citrus clementina Ciclev10004234m.g I 0.758
Eucgr.H04783 Eucalyptus grandis Eucgr.H04783 I 0.758
Si034054m.g Setaria italica Si034054m.g I 0.758
Aquca_008_00132 Aquilegia coerulea Aquca_008_00132 I 0.758
28281.m000379 Ricinus communis 28281.m000379 I 0.758
orange1.1g001759m.g Citrus sinensis orange1.1g001759m.g I 0.758
Traes_2BS_00DF01F06 Triticum aestivum Traes_2BS_00DF01F06 N 0.758
Si028797m.g Setaria italica Si028797m.g I 0.758
Si034076m.g Setaria italica Si034076m.g I 0.758
ONIVA10G07730 Oryza nivara ONIVA10G07730 I 0.758
MTR_4g094215 Medicago truncatula MTR_4g094215 I 0.758
MLOC_63299 Hordeum vulgare MLOC_63299 I 0.758
OB10G16130 Oryza brachyantha OB10G16130 I 0.758
OBART03G06570 Oryza barthii OBART03G06570 I 0.758
OBART10G08060 Oryza barthii OBART10G08060 I 0.758
LPERR03G05920 Leersia perrieri LPERR03G05920 I 0.758
GSMUA_Achr1G21540_001 Musa acuminata GSMUA_Achr1G21540_001 I 0.758
BGIOSGA011302 Oryza indica BGIOSGA011302 I 0.758
BRADI1G21372 Brachypodium distachyon BRADI1G21372 I 0.758
GLYMA05G31190 Glycine max GLYMA05G31190 I 0.758
GLYMA08G14370 Glycine max GLYMA08G14370 I 0.758
OGLUM03G06680 Oryza glumaepatula OGLUM03G06680 I 0.758
OGLUM10G07770 Oryza glumaepatula OGLUM10G07770 I 0.758
ORGLA10G0066800 Oryza glaberrima ORGLA10G0066800 I 0.758
ORUFI03G06510 Oryza rufipogon ORUFI03G06510 I 0.758
ORUFI10G08490 Oryza rufipogon ORUFI10G08490 I 0.758
OS03G0191000 Oryza sativa OS03G0191000 I 0.758
OS10G0375600 Oryza sativa OS10G0375600 I 0.758
ORGLA03G0064000 Oryza glaberrima ORGLA03G0064000 I 0.758
OLONG_003971 Oryza longistaminata OLONG_003971 I 0.758
OLONG_001033 Oryza longistaminata OLONG_001033 I 0.758
Pavir.J35200 Panicum virgatum Pavir.J35200 I 0.758
OMERI03G06500 Oryza meridionalis OMERI03G06500 I 0.758
ONIVA02G06230 Oryza nivara ONIVA02G06230 I 0.758
chr6.CM0314.100.nd Lotus japonicus chr6.CM0314.100.nd I 0.727
Pavir.Ia03131 Panicum virgatum Pavir.Ia03131 I 0.727
ORUFI07G23760 Oryza rufipogon ORUFI07G23760 I 0.727
OLONG_018130 Oryza longistaminata OLONG_018130 I 0.727
ONIVA07G22160 Oryza nivara ONIVA07G22160 I 0.727
OPUNC03G06340 Oryza punctata OPUNC03G06340 I 0.727
OGLUM07G22660 Oryza glumaepatula OGLUM07G22660 I 0.727
OBART07G22710 Oryza barthii OBART07G22710 I 0.727
Bra038534 Brassica rapa Bra038534 I 0.727
LPERR07G19680 Leersia perrieri LPERR07G19680 I 0.727
OPUNC07G21310 Oryza punctata OPUNC07G21310 I 0.727
ORGLA07G0175700 Oryza glaberrima ORGLA07G0175700 I 0.727
mgf010601m Mimulus guttatus mgf010601m I 0.727
mgf015897m Mimulus guttatus mgf015897m I 0.727
Cla018421 Citrullus lanatus Cla018421 I 0.727
Traes_5BL_92902F993 Triticum aestivum Traes_5BL_92902F993 I 0.727
ORGLA10G0167300 Oryza glaberrima ORGLA10G0167300 I 0.727
Sb02g039710 Sorghum bicolor Sb02g039710 I 0.727
evm.TU.supercontig_213.9 Carica papaya evm.TU.supercontig_213.9 I 0.727